Dbfetch
ID GU121962; SV 1; linear; genomic DNA; STD; HUM; 2082 BP. XX AC GU121962; XX DT 04-AUG-2010 (Rel. 105, Created) DT 04-AUG-2010 (Rel. 105, Last updated, Version 1) XX DE Homo sapiens isolate GM17178 natural killer immunoglobulin-like receptor DE (KIR2DL5) gene, KIR2DL5B*002 variant allele, complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-2082 RX DOI; 10.1007/s00251-010-0458-8. RX PUBMED; 20585770. RA Hou L., Chen M., Jiang B., Wu D., Ng J., Hurley C.K.; RT "Thirty allele-level haplotypes centered around KIR2DL5 define the RT diversity in an African American population"; RL Immunogenetics 62(8):491-498(2010). XX RN [2] RP 1-2082 RA Hou L., Hurley C.K., Jiang B., Chen M.; RT ; RL Submitted (20-OCT-2009) to the INSDC. RL Oncology/C.W. Bill Young Department of Defense Marrow Donor Program, RL Georgetown University Medical Center, 11333 Woodglen Drive, Rockville, MD RL 20852, USA XX DR MD5; 7246ebb3072119106871a130407b96a5. DR IPD-KIR; KIR2DL5B*0020201; KIR00535. XX FH Key Location/Qualifiers FH FT source 1..2082 FT /organism="Homo sapiens" FT /isolate="GM17178" FT /mol_type="genomic DNA" FT /cell_type="lymphocyte" FT /db_xref="taxon:9606" FT gene <255..>2082 FT /gene="KIR2DL5" FT /allele="KIR2DL5B*002 variant" FT mRNA join(<255..288,389..424,525..809,910..1203,1304..1354, FT 1455..1559,1660..1712,1813..>2082) FT /gene="KIR2DL5" FT /allele="KIR2DL5B*002 variant" FT /product="natural killer immunoglobulin-like receptor" FT CDS join(255..288,389..424,525..809,910..1203,1304..1354, FT 1455..1559,1660..1712,1813..2082) FT /codon_start=1 FT /gene="KIR2DL5" FT /allele="KIR2DL5B*002 variant" FT /product="natural killer immunoglobulin-like receptor" FT /protein_id="ADJ78346.1" FT /translation="MSLMVVSMACVGFFLLQGAWTHEGGQDKPLLSAWPSAVVPRGGHV FT TLLCRSRLGFTIFSLYKEDGVPVPELYNKIFWKSILMGPVTPAHAGTYRCRGSHPRSPI FT EWSAPSNPLVIVVTGLFGKPSLSAQPGPTVRTGENVTLSCSSRSSFDMYHLSREGRAHE FT PRLPAVPSVDGTFQADFPLGPATHGGTYTCFSSLHDSPYEWSDPSDPLLVSVTGNSSSS FT SSSPTEPSSKTGIRRHLHILIGTSVAIILFIILFFFLLHCCCSNKKNAAVMDQEPAGDR FT TVNREDSDDQDPQEVTYAQLDHCVFTQTKITSPSQRPKTPPTDTTMYMELPNAKPRSLS FT PAHKHHSQALRGSSRETTALSQNRVASSHVPAAGI" FT gap 289..388 FT /estimated_length=unknown FT gap 425..524 FT /estimated_length=unknown FT gap 810..909 FT /estimated_length=unknown FT gap 1204..1303 FT /estimated_length=unknown FT gap 1355..1454 FT /estimated_length=unknown FT gap 1560..1659 FT /estimated_length=unknown FT gap 1713..1812 FT /estimated_length=unknown XX SQ Sequence 2082 BP; 311 A; 408 C; 352 G; 311 T; 700 other; gatctgagac gtgttgtgag ttggtcatag tgaaggacgc gaggtgtcga ttctagtgag 60 aacaatttcc aggaagccgt gttccgctct tgagcaagca cccactgggc ctcatgcaag 120 gtagaaagag cctgcgtacg tcaccctccc atgatgtggt caacatgtaa actgcatggg 180 cagggcgcca aataacatcc tgtgcgctgc tgagctgagc tggggcgcgg ccgcctgtct 240 gcaccggcag caccatgtcg ctcatggtcg tcagcatggc gtgtgttgnn nnnnnnnnnn 300 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360 nnnnnnnnnn nnnnnnnnnn nnnnnnnngg ttcttcttgc tgcagggggc ctggacacat 420 gaggnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 480 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnngtggac aggacaagcc 540 cttgctgtct gcctggccca gcgctgtggt gcctcgagga ggacatgtga ctcttctgtg 600 tcgctctcgt cttgggttta ccatcttcag tctgtacaaa gaagatgggg tgcctgtccc 660 tgagctctac aacaaaatat tctggaagag catcctcatg ggccctgtga cccctgcaca 720 cgcagggacc tacagatgtc ggggttcaca cccgcgctcc cccattgagt ggtcggcacc 780 cagcaacccc ctggtgatcg tggtcacagn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 840 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 900 nnnnnnnnng tctatttggg aaaccttcac tctcagccca gccgggcccc acggttcgca 960 caggagagaa cgtgaccttg tcctgcagct ccaggagctc atttgacatg taccatctat 1020 ccagggaggg gagggcccat gaacctaggc tccctgcagt gcccagcgtc gatggaacat 1080 tccaggctga ctttcctctg ggccctgcca cccacggagg gacctacaca tgcttcagct 1140 ctctccatga ctcaccctat gagtggtcag acccgagtga cccactgctt gtttctgtca 1200 cagnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1260 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnngaaactc ttcaagtagt 1320 tcatcttcac ccactgaacc aagctccaaa actgnnnnnn nnnnnnnnnn nnnnnnnnnn 1380 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1440 nnnnnnnnnn nnnngtatcc gcagacacct gcacattctg attgggacct cagtggctat 1500 catcctcttc atcatcctct tcttctttct ccttcattgc tgctgctcca acaaaaagan 1560 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1620 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnna tgctgctgta atggaccaag 1680 agcctgccgg ggacagaaca gtgaacaggg agnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1740 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1800 nnnnnnnnnn nngactctga tgatcaagac cctcaggagg tgacatatgc acagttggat 1860 cactgcgttt tcacacagac aaaaatcact tccccttctc agaggcccaa gacacctcca 1920 acagatacca ccatgtacat ggaacttcca aatgctaagc caagatcatt gtctcctgcc 1980 cataagcacc acagtcaggc cttgagggga tcttctaggg agacaacagc cctgtctcaa 2040 aaccgggttg ccagctccca tgtaccagca gctggaatct ga 2082 //