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EBI Dbfetch

ID   GQ999129; SV 1; linear; genomic DNA; STD; HUM; 921 BP.
XX
AC   GQ999129;
XX
DT   02-NOV-2009 (Rel. 102, Created)
DT   19-JAN-2011 (Rel. 107, Last updated, Version 2)
XX
DE   Homo sapiens MHC class I antigen (HLA-B) gene, HLA-B*40 variant allele,
DE   exons 2, 3 and partial cds.
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-921
RX   DOI; 10.1111/j.1399-0039.2010.01586.x.
RX   PUBMED; 21214529.
RA   Miao F., Sun H., Pan N., Shen Y., Xie W., Zhang J.;
RT   "Two novel HLA class I alleles, HLA-B*40:122 and HLA-B*40:127";
RL   Tissue Antigens 77(2):156-157(2011).
XX
RN   [2]
RP   1-921
RA   Zhang J., Xie W., Sun H., Miao F., Pan N.;
RT   ;
RL   Submitted (24-SEP-2009) to the INSDC.
RL   Department of Genetics and Developmental, Southeast University Medical
RL   School, No.87 DingJiaQiao Road, Nanjing, Jiangsu 210009, China
XX
DR   MD5; 6855a6bc8a64bf006bcb717a38ea3ba0.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..921
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT   gene            <1..>921
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*40 variant"
FT   mRNA            join(<74..343,588..>863)
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*40 variant"
FT                   /product="MHC class I antigen"
FT   CDS             join(<74..343,588..>863)
FT                   /codon_start=3
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*40 variant"
FT                   /product="MHC class I antigen"
FT                   /db_xref="GOA:D0V0K8"
FT                   /db_xref="IMGT/HLA:B*40:122"
FT                   /db_xref="InterPro:IPR001039"
FT                   /db_xref="InterPro:IPR011161"
FT                   /db_xref="InterPro:IPR011162"
FT                   /db_xref="InterPro:IPR027648"
FT                   /db_xref="UniProtKB/TrEMBL:D0V0K8"
FT                   /protein_id="ACY24447.1"
FT                   /translation="SHSMRYFHTSVSRPGRGEPRFITVGYVDDTLFVRFDSDATSPRKE
FT                   PRAPWIEQEGPEYWDRETQISKTNTQTYRESLRNLRGYYNQSEAGSHTLQSMYGCDVGP
FT                   DGRLLRGHNQYAYDGKDYIALNEDLRSWTAADTAAEITQRKWEAARVAEQLRAYLEGEC
FT                   VEWLRRYLENGKETLQRA"
FT   exon            74..343
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*40 variant"
FT                   /number=2
FT   exon            588..863
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*40 variant"
FT                   /number=3
XX
SQ   Sequence 921 BP; 157 A; 309 C; 339 G; 116 T; 0 other;
     ggcgggggcg caggacccgg ggagccgcgc cgggaggagg gtcgggcggg tctcagcccc        60
     tcctcgcccc caggctccca ctccatgagg tatttccaca cctccgtgtc ccggcccggc       120
     cgcggggagc cccgcttcat caccgtgggc tacgtggacg acacgctgtt cgtgaggttc       180
     gacagcgacg ccacgagtcc gaggaaggag ccgcgggcgc catggataga gcaggagggg       240
     ccggagtatt gggaccggga gacacagatc tccaagacca acacacagac ttaccgagag       300
     agcctgcgga acctgcgcgg ctactacaac cagagcgagg ccggtgagtg accccggccc       360
     ggggcgcagg tcacgactcc ccatccccca cgtacggccc gggtcgcccc gagtctccgg       420
     gtccgagatc cgcccccgag gccgcgggac ccgcccagac cctcgaccgg cgagagcccc       480
     aggcgcgttt acccggtttc attttcagtt gaggccaaaa tccccgcggg ttggtcgggg       540
     cggggcgggg ctcgggggga cggggctgac cgcgggggcg gggccagggt ctcacaccct       600
     ccagagcatg tacggctgcg acgtggggcc ggacgggcgc ctcctccgcg ggcataacca       660
     gtacgcctac gacggcaagg attacatcgc cctgaacgag gacctgcgct cctggaccgc       720
     cgcggacacg gcggctgaga tcacccagcg caagtgggag gcggcccgtg tggcggagca       780
     gctgagagcc tacctggagg gcgagtgcgt ggagtggctc cgcagatacc tggagaacgg       840
     gaaggagacg ctgcagcgcg cgggtaccag gggcagtggg gagccttccc catctcctat       900
     aggtcgccgg ggatggcctc c                                                 921
//


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