Dbfetch
ID GQ996943; SV 1; linear; genomic DNA; STD; HUM; 4291 BP. XX AC GQ996943; XX DT 21-OCT-2009 (Rel. 102, Created) DT 21-OCT-2009 (Rel. 102, Last updated, Version 1) XX DE Homo sapiens MHC class I antigen (HLA-A) gene, HLA-A*330301 allele, DE complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-4291 RA Xu Y., Deng Z., Wang D.; RT "Characterization and polymorphism analyses of HLA-A genomic full length in RT Chinese Han population"; RL Unpublished. XX RN [2] RP 1-4291 RA Xu Y., Deng Z., Wang D.; RT ; RL Submitted (23-SEP-2009) to the INSDC. RL Immunogenetic Laboratory, Shenzhen Blood Center, 2# Meigang South Street, RL Nigang West Road, Shenzhen, Guangdong 518035, China XX DR MD5; 8803fb1ac51d7e5889b3778745c787df. DR IMGT/HLA; HLA-A*33:03:01:01; HLA00106. XX FH Key Location/Qualifiers FH FT source 1..4291 FT /organism="Homo sapiens" FT /chromosome="6" FT /map="6p21.3" FT /mol_type="genomic DNA" FT /PCR_primers="fwd_seq: actcagagctawggaatgatg, rev_seq: FT atggagcagcaaagatgac" FT /db_xref="taxon:9606" FT gene 1..4291 FT /gene="HLA-A" FT /allele="HLA-A*330301" FT misc_feature 1..822 FT /gene="HLA-A" FT /allele="HLA-A*330301" FT /note="contains promoter and 5' UTR" FT mRNA join(<823..895,1025..1294,1536..1811,2412..2687,2787..2903, FT 3344..3376,3519..3566,3736..4291) FT /gene="HLA-A" FT /allele="HLA-A*330301" FT /product="MHC class I antigen" FT CDS join(823..895,1025..1294,1536..1811,2412..2687,2787..2903, FT 3344..3376,3519..3566,3736..3740) FT /codon_start=1 FT /gene="HLA-A" FT /allele="HLA-A*330301" FT /product="MHC class I antigen" FT /note="glycoprotein; human leucocyte antigen class I FT molecule" FT /db_xref="GOA:Q2MJJ5" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:Q2MJJ5" FT /protein_id="ACX71603.1" FT /translation="MAVMAPRTLLLLLLGALALTQTWAGSHSMRYFTTSVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDRNTRNVKAHSQIDRVDLGT FT LRGYYNQSEAGSHTIQMMYGCDVGSDGRFLRGYQQDAYDGKDYIALNEDLRSWTAADMA FT AQITQRKWEAARVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDPPKTHMTHHAVSDHE FT ATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWASVVVPSGQEQRY FT TCHVQHEGLPKPLTLRWEPSSQPTIPIVGIIAGLVLFGAVFAGAVVAAVRWRRKSSDRK FT GGSYSQAASSDSAQGSDMSLTACKV" FT 3'UTR 3741..4291 FT /gene="HLA-A" FT /allele="HLA-A*330301" XX SQ Sequence 4291 BP; 895 A; 1173 C; 1248 G; 975 T; 0 other; gtaaatttaa aatactacaa gcaggagtca caggtacatt gtctgggaaa gtgaaactta 60 gtagctttgt gagtcctgtt gtaaggctgt tggacacatt tatacatcaa ggggccaaag 120 tcacattttt tacctattag attcctgatc attcaggggt taccaagatt ctgctaccca 180 ctgtagttaa taaacaaaga gcaaattggt ctctattctg tctcatgcac tcaggcgcaa 240 cttttcccga ttaaaaacaa aaacaacaac aacaaaaatc tacacctcca ttcccagagc 300 aatcttactc tctggcacca aactccatgg ggtgattttt cttctagaag agtccaggtg 360 gacaggtaag gagtgggagt cagggagtcc agttcaggga cagagattac gggatgaaaa 420 gtgaaaggag agggacgggg cccatgccca gggtttctcc cttgtttctc agacagctct 480 tgggccaaga ctcagggaga cattgagaca gagcgcttgg cacaggagca gaggggtcag 540 ggcgaagtac cagggcccca ggcgtggctc tcagggtctc aggccccgaa ggcggtgtat 600 ggattgggga gtcccagcct tggggattcc ccaactccgc agtttctttt ctccctctcc 660 caacctatgt agggtccttc ttcctggata ctcacgacgc ggacccagtt ctcactccca 720 ttgggtgtcg ggtttccaga gaagccaatc agtgtcgtcg cggtcgcggt tctaaagtcc 780 gcacgcaccc accgggactc agattctccc cagacgccga ggatggccgt catggcgccc 840 cgaaccctcc tcctgctact cttgggggcc ctggccctga cccagacctg ggcgggtgag 900 tgcggggtcg tggggaaacc gcctctgcgg ggagaagcaa ggggcccgcc cggcgggggc 960 gcaggacccg ggtagccgcg ccgggaggag ggtcgggcgg atctcagcca ctcctcgccc 1020 ccaggctccc actccatgag gtatttcacc acatccgtgt cccggcccgg ccgcggggag 1080 ccccgcttca tcgccgtggg ctacgtggac gacacgcagt tcgtgcggtt cgacagcgac 1140 gccgcgagcc agaggatgga gccgcgggcg ccgtggatag agcaggaggg gccggagtat 1200 tgggaccgga acacacggaa tgtgaaggcc cactcacaga ttgaccgagt ggacctgggg 1260 accctgcgcg gctactacaa ccagagcgag gccggtgagt gaccccagcc cggggcgcag 1320 gtcacgacct ctcatccccc acggacgggc caggtcaccc acagtctccg ggtccgagat 1380 ccaccccgaa gccgcgggac cccgagaccc ttgccccggg agaggcccag gcgcctttac 1440 ccggtttcat tttcagttta ggccaaaaat ccccccgggt tggtcggggc cggacggggc 1500 tcgggggact gggctgaccg tggggtcggg gccaggttct cacaccatcc agatgatgta 1560 tggctgcgac gtggggtcgg acgggcgctt cctccgcggg taccagcagg acgcctacga 1620 cggcaaggat tacatcgcct tgaacgagga cctgcgctct tggaccgcgg cggacatggc 1680 ggctcagatc acccagcgca agtgggaggc ggcccgtgtg gcggagcagt tgagagccta 1740 cctggagggc acgtgcgtgg agtggctccg cagatacctg gagaacggga aggagacgct 1800 gcagcgcacg ggtaccaggg gccacggggc gcctccctga tcgcctgtag atctcccggg 1860 ctggcctccc acaaggaggg gagacaattg ggaccaacac tagaatatca ccctccctct 1920 ggtcctgagg gagaggaatc ctcctgggtt tccagatcct gtaccagaga gtgactctga 1980 ggttccgccc tgctctgtga cacaattaag ggataaaatc tctgaaggaa tgacgggaag 2040 acgatccctc gaatactgat gagtggttcc ctttgacaca caccggcagc agccttgggc 2100 ccgtgacttt tcctctcagg ccttgttctc tgcttcacac tcaatgtgtg tgggggtctg 2160 agtccagcac ttctgagtcc ctcagcctcc actcaggtca ggaccagaag tcgctgttcc 2220 ctcttcaggg actagaattt tccacggaat aggagattat cccaggtgcc tgtgtccagg 2280 ctggtgtctg ggttctgtgc tcccttcccc atcccaggtg tcctgtccat tctcaagata 2340 gccacatgtg tgctggagga gtgtcccatt acagatgcaa aatgcctgaa tgttctgact 2400 cttcctgaca gaccccccca agacgcatat gactcaccac gctgtctctg accatgaggc 2460 caccctgagg tgctgggccc tgagcttcta ccctgcggag atcacactga cctggcagcg 2520 ggatggggag gaccagaccc aggacacgga gctcgtggag accaggcctg caggggatgg 2580 aaccttccag aagtgggcgt ctgtggtggt gccttctgga caggagcaga gatacacctg 2640 ccatgtgcag catgagggtc tccccaagcc cctcaccctg agatggggta aggagggaga 2700 tgggggtgtc atgtctttta gggaaagcag gagcctctct gacctttagc agggtcaggg 2760 cccctcacct tcccctcttt tcccagagcc gtcttcccag cccaccatcc ccatcgtggg 2820 catcattgct ggcctagttc tctttggagc tgtgttcgct ggagctgtgg tcgctgctgt 2880 gaggtggagg aggaagagct caggtggggt gaaggggtga agggtgggtc tgagatttct 2940 tgtctcactg agggttccaa gacccaggta gaagtgtgcc ctgcctcgtt actgggaagc 3000 accatccaca attatgggcc tacccagcct gggccctgtg tgccagcact tactcttttg 3060 taaagcacct gttaaaatga aggacagatt tatcaccttg attatggcgg tgatgggacc 3120 tgatcccagc agtcacaagt cacaggggaa ggtccctgag gaccttcagg agggcggttg 3180 gtccaggacc cacacctgct ttcttcatgt ttcctgatcc cgccctgggt ctgcagtcac 3240 acatttctgg aaacttctct gaggtccaag acttggaggt tcctctagga ccttaaggcc 3300 ctggctcctt tctggtatct cacaggacat tttcttccca cagatagaaa aggagggagc 3360 tactctcagg ctgcaagtaa gtatgaagga ggatgatcca agaaatcact gggatattgt 3420 gtttgggagc ccgtggggga gctcacccac cccacaattc ctcctctagc cacatcttct 3480 gtgggatctg accaggttct gtttttgtcc taccccaggc agtgacagtg cccagggctc 3540 tgatatgtct ctcacagctt gtaaaggtga gagcctggag ggcctgatgt gtgttgggtg 3600 ttgggcggaa cagtggacgc agctgtgcta tggggtttct ttgcattgga tgtattgagc 3660 atgcgatggg ctgtttaaag tgtgactcct cactgtgaca gatacgaatt tgttcatgaa 3720 tatttttttc tatagtgtga gacagctgcc ttgtgtggga ctgagaggca agatttgttc 3780 ctgcccttcc ctttgtgact tgaagtaccc tgactttgtt tctgcaaagg cacctgcatg 3840 tgtctgtgtt cttgtaggca taatgtgagg aggtggggag accaccccac ccccatgtcc 3900 accatgaccc tcttcccacg ctgacctgtg ctccctcccc aatcatcttt cctgttccag 3960 agaggtgggg ctgaggtgtc tccatctctg cctcaacttc atggtgcact gagctgtaac 4020 ttcttccttc cctattaaaa ttagaacctg agtataaatt tactttctca aattcttgcc 4080 atgagaggtt gatgagttaa ttaaaggaga agattcctaa aatttgagag acaaaataaa 4140 tggaacacat gagaaccttc cagagtccac gtgttgctta tgctgatttg ttgcagggga 4200 ggagagtaga tggggctgtg cccagtttct gttccggcca ccatgggctt tatgtggtca 4260 ctgcttagct gggtcatctt tgctgctcca t 4291 //