Dbfetch
ID GQ472839; SV 1; linear; genomic DNA; STD; HUM; 4348 BP. XX AC GQ472839; XX DT 27-SEP-2009 (Rel. 102, Created) DT 27-SEP-2009 (Rel. 102, Last updated, Version 1) XX DE Homo sapiens MHC class I antigen (HLA-Cw) gene, HLA-Cw*070102 allele, DE complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-4348 RA Xu Y., Deng Z., Wang D.; RT "Characterization and polymorphism analyses of HLA-C genomic full length in RT Chinese Han population"; RL Unpublished. XX RN [2] RP 1-4348 RA Xu Y., Deng Z., Wang D.; RT ; RL Submitted (11-AUG-2009) to the INSDC. RL Immunogenetic laboratory, Shenzhen Blood Center, 2# Meigang South Street, RL Nigang West Road, Shenzhen, Guangdong 518035, China XX DR MD5; b12f626b8f30b1702cde3f6841411a61. DR Ensembl-Gn; ENSG00000233841; homo_sapiens. DR Ensembl-Tr; ENST00000424832; homo_sapiens. DR IMGT/HLA; HLA-C*07:01:02:01; HLA00992. XX FH Key Location/Qualifiers FH FT source 1..4348 FT /organism="Homo sapiens" FT /chromosome="6" FT /map="6p21.3" FT /mol_type="genomic DNA" FT /PCR_primers="fwd_seq: tggactcacacarggaaactc, rev_seq: FT gggacaaggacaatggagcag" FT /db_xref="taxon:9606" FT gene <865..>3765 FT /gene="HLA-Cw" FT /allele="HLA-Cw*070102" FT mRNA join(<865..937,1068..1337,1588..1863,2451..2726,2851..2970, FT 3409..3441,3549..3596,3761..>3765) FT /gene="HLA-Cw" FT /allele="HLA-Cw*070102" FT /product="MHC class I antigen" FT CDS join(865..937,1068..1337,1588..1863,2451..2726,2851..2970, FT 3409..3441,3549..3596,3761..3765) FT /codon_start=1 FT /gene="HLA-Cw" FT /allele="HLA-Cw*070102" FT /product="MHC class I antigen" FT /note="glycoprotein" FT /db_xref="GOA:O19617" FT /db_xref="HGNC:HGNC:4933" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:O19617" FT /protein_id="ACV91119.1" FT /translation="MRVMAPRALLLLLSGGLALTETWACSHSMRYFDTAVSRPGRGEPR FT FISVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQNYKRQAQADRVSLRN FT LRGYYNQSEDGSHTLQRMYGCDLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTA FT AQITQRKLEAARAAEQLRAYLEGTCVEWLRRYLENGKETLQRAEPPKTHVTHHPLSDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRY FT TCHMQHEGLQEPLTLSWEPSSQPTIPIMGIVAGLAVLVVLAVLGAVVTAMMCRRKSSGG FT KGGSCSQAACSNSAQGSDESLITCKA" XX SQ Sequence 4348 BP; 877 A; 1198 C; 1303 G; 970 T; 0 other; tggctagaga atgaggataa ctttaaatgc aacaacccag agtcacagat ccatagtctg 60 cgaaagtaaa acaggagctt tgagaattta attgtaatgc agttttgaca caggtctttc 120 acagattgga attctaatca ttcagggatt accaatattg tgctacctac tgtatcaata 180 aacaaaaagg aaactggtct ctatgagaat ctctacctgg tgctttcaga caaaacttca 240 ccaggtttaa agagaaaact cctgactcta cacgtccatt cccagggcga gctcactgtc 300 tggcatcaag ttccccatgg tgagtttccc tgtacaagag tccaagggga gaggtaagtg 360 tcctttattt tgctggatgt agtttaatat tacctgaggt gaggtaaggt aaggcaaagg 420 gtgggaggca gggagtccag ttcagggacg gggattccag gaggagaagt gaaggggaag 480 gggctgggcg cagccttggg gtctctccct ggtttccaca gacagatcct tgtccaggac 540 tcaggcacac agtgtgacaa agatgcttgg tgtaggagaa gagggatcag gacgaagtcc 600 caggtcccgg acggggctct cagggtctca ggctccaagg gccgtgtctg cattggggag 660 gcgccgcgtt ggggattctc cactcccctg agtttcactt ctcccaacct gcgtcgggtc 720 cttcttcctg aatactcatg acgcgtcccc aattcccact cccattgggt gtcgggttct 780 agagaagcca atcagcgtct ccgcagtccc ggttctaaag tccccagtca cccacccgga 840 ctcacattct ccccagaggc cgagatgcgg gtcatggcgc cccgagccct cctcctgctg 900 ctctcgggag gcctggccct gaccgagacc tgggcctgtg agtgcggggt tgggagggaa 960 gcggcctctg cggagaggag cgaggggccc gcccggcgag ggcgcaggac ccggggagcc 1020 gcgcagggag gtgggtcggg cgggtctcag cccctcctcg cccccaggct cccactccat 1080 gaggtatttc gacaccgccg tgtcccggcc cggccgcgga gagccccgct tcatctcagt 1140 gggctacgtg gacgacacgc agttcgtgcg gttcgacagc gacgccgcga gtccgagagg 1200 ggagccgcgg gcgccgtggg tggagcagga ggggccggag tattgggacc gggagacaca 1260 gaactacaag cgccaggcac aggctgaccg agtgagcctg cggaacctgc gcggctacta 1320 caaccagagc gaggacggtg agtgaccccg gcccggggcg caggtcacga cccctcccca 1380 tcccccacgg acggcccggg tcgccccgag tctccccgtc tgagatccac cccaaggtgg 1440 atctgcggaa cccgcccaga ccctcgaccg gagagagccc cagtcgcctt tacccggttt 1500 cattttcggt ttaggccaaa atccccgcgg gttggtcggg gcggggcggg gctcggggga 1560 ctgggctgac cgcgggggcg gggccagggt ctcacaccct ccagaggatg tatggctgcg 1620 acctggggcc cgacgggcgc ctcctccgcg ggtatgacca gtccgcctac gacggcaagg 1680 attacatcgc cctgaacgag gacctgcgct cctggaccgc cgcggacacc gcggctcaga 1740 tcacccagcg caagttggag gcggcccgtg cggcggagca gctgagagcc tacctggagg 1800 gcacgtgcgt ggagtggctc cgcagatacc tggagaacgg gaaggagacg ctgcagcgcg 1860 caggtaccag gggcagtggg gagccttccc catctcctat agatctcccg ggatggcctc 1920 ccacgaggag gggaggaaaa tgggatcagc actggaatat cgccctccct tgaatggaga 1980 atggcatgag ttttcctgag tttcctctga gggccccctc tgctctctag gacaattaag 2040 ggatgaagtc tctgaggaaa tggaggggaa gacagtccct ggaatactga tcaggggtct 2100 cctttgacca ctttgaccac tgcagcagct gtggtcaggc tgctgacctt tctctcaggc 2160 cttgttctct gcctcacact caatgtgtct gaaggtttga ttccagcttt tctgagtcct 2220 gcagcctcca ctcaggtcag gaccagaagt cgctgttcct ccctcagaga ctagaacttt 2280 ccaatgaata ggagattatc ccaggtgcct gtgtccaggc tggcgtctgg gttctgtgcc 2340 gccttcccca ccccaggtgt cctgtccatt ctcaggatgg tcacatgggc gctgctggag 2400 tgtcccaaga gagatgcaaa gtgtctgaat tttctgactc ttcccgtcag aacccccaaa 2460 gacacacgtg acccaccacc ccctctctga ccatgaggcc accctgaggt gctgggccct 2520 gggcttctac cctgcggaga tcacactgac ctggcagcgg gatggggagg accagaccca 2580 ggacaccgag cttgtggaga ccaggccagc aggagatgga accttccaga agtgggcagc 2640 tgtggtggtg ccttctggac aagagcagag atacacgtgc catatgcagc acgaggggct 2700 gcaagagccc ctcaccctga gctggggtaa ggaggggaat ggggggtcac atctcttatc 2760 agagaaagca gaagtccttc tggagccctt cagccgggtc agggctgagg cttgggggtc 2820 agggcccctc accttctcct cctttcccag agccatcttc ccagcctacc atccccatca 2880 tgggcatcgt tgctggcctg gctgtcctgg ttgtcctagc tgtccttgga gctgtggtca 2940 ccgctatgat gtgtaggagg aagagctcag gtagggaagg ggtgaagagc ggggtctggg 3000 ttttcttgtc ccactgggag tttcaagccc caggtagaag tgtgccccgc cttgttactg 3060 gaagcaccat ccacacatgg gccatcccag cctgggaccc tgtgtgccag cacttactct 3120 tttgtgacac atgtgacaat gaaggacgga tgtatcacct tgatgattat ggtgttgggg 3180 tcctgattcc agcattcatg agtcagggga aggtccctgc taaggacaga ccttaggagg 3240 gcagttggtc cagaacccac aactgctttc cccatgtttc ctgatcctgc cctgggtctg 3300 cagtcgtagt tctggaaact tctcttgggt ccaagactag gaggttcccc taagatcaca 3360 tggccctgcc tcctcccagt cccctcatag ggcattttct tcccacaggt ggaaaaggag 3420 ggagctgctc tcaggctgcg tgtaagtgat ggcggcgggc gtgtggagga gctcacctac 3480 tccataattc ctcttgtccc acatctcctg cgggctctga ccaggtcttt ttttttgttc 3540 taccccaggc agcaacagtg cccagggctc tgatgagtct ctcatcactt gtaaaggtga 3600 gattctgggg agctgaagtg gtcgggggtg gggcagaggg aaaaggcctg ggtaatgggg 3660 attctttgat tgggacgttt cgagtgtgtg gtgggccgtt cagagtgtca tcacttacca 3720 tgactgacct gaatttgttc atgactattg tgttctgtag cctgagacag ctgcctgtgt 3780 gggactgaga tgcaggattt cttcacacct ctcctttgtg acttcaagag cctctggcat 3840 ctctttctgc aaaggcgtct gaatgtgtct gcgttcctgt tagcataatg tgaggaggtg 3900 gagagacagc ccacccccgt gtccaccgtg acccctgtcc ccacactgac ctgtgttccc 3960 tccccgatca tctttcctgt tccagagagg tggggctgga tgtctccatc tctgtctcaa 4020 attcatggtg cactgagctg caacttctta cttccctaat gaagttaaga acctgaatat 4080 aaatttgtgt tctcaaatat ttgctatgaa gcgttgatgg attaattaaa taagtcaatt 4140 cctagaagtt gagagagcaa ataaagacct gagaaccttc cagaatttgc atgttcgctg 4200 tgctgagtct gttgcaggtg ggggtgggga aggctgtgag gagccgagtg tggacggggc 4260 ctgtgcctag ttgctgttca gttcttcatg ggctttatgt ggtcagtcct cagctgggtc 4320 accttcactg ctccattgtc cttgtccc 4348 //