Dbfetch

ID   GQ398778; SV 1; linear; genomic DNA; STD; HUM; 788 BP.
XX
AC   GQ398778;
XX
DT   02-SEP-2009 (Rel. 102, Created)
DT   27-APR-2012 (Rel. 112, Last updated, Version 2)
XX
DE   Homo sapiens MHC class I antigen (HLA-B) gene, HLA-B*4004 variant allele,
DE   exons 2, 3 and partial cds.
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-788
RX   DOI; 10.1111/j.1399-0039.2011.01787.x.
RX   PUBMED; 22050210.
RA   Wowk P.F., Mattar S.B., Poerner F., de Rezende G.Y., Bicalho Mda G.;
RT   "Two novel alleles, HLA-B*40:125 and B*40:129, in the Brazilian
RT   population";
RL   Tissue Antigens 79(2):137-138(2012).
XX
RN   [2]
RP   1-788
RA   Bicalho M.G., Mattar S.B., Uehara C.J., Ribas F.;
RT   ;
RL   Submitted (21-JUL-2009) to the INSDC.
RL   Genetics, Federal University of Parana, Sala 31, Setor de Ciencias
RL   Biologicas, Centro Politecnico, Jardim das Americas, CP19071, Curitiba,
RL   Parana 81530980, Brazil
XX
DR   MD5; 7ede3c7790ba27fbc9d2b61a399d6c04.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..788
FT                   /organism="Homo sapiens"
FT                   /chromosome="6"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT   gene            <1..>788
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*4004 variant"
FT   mRNA            join(<1..270,513..>788)
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*4004 variant"
FT                   /product="MHC class I antigen"
FT   CDS             join(<1..270,513..>788)
FT                   /codon_start=3
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*4004 variant"
FT                   /product="MHC class I antigen"
FT                   /db_xref="IMGT/HLA:B*40:129"
FT                   /db_xref="InterPro:IPR001039"
FT                   /db_xref="InterPro:IPR011161"
FT                   /db_xref="InterPro:IPR011162"
FT                   /db_xref="InterPro:IPR037055"
FT                   /db_xref="UniProtKB/TrEMBL:C8CH43"
FT                   /protein_id="ACV07655.1"
FT                   /translation="SHSMRYFYTAMSRPGRGEPRFITVGYVDDTLFVRFDSDATSPRKE
FT                   PRAPWIEQEGPEYWDRETQISKTNTQTYRESLRNLRGYYNQSEAGSHIIQRMYGCDLGP
FT                   DGRLLRGHNQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAARVAEQLRAYLEGEC
FT                   VEWLRRYLENGKETLQRA"
FT   exon            1..270
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*4004 variant"
FT                   /number=2
FT   gap             271..512
FT                   /estimated_length=242
FT   exon            513..788
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*4004 variant"
FT                   /number=3
XX
SQ   Sequence 788 BP; 114 A; 170 C; 190 G; 72 T; 242 other;
     gctcccactc catgaggtat ttctacaccg ccatgtcccg gcccggccgc ggggagcccc        60
     gcttcatcac cgtgggctac gtggacgaca cgctgttcgt gaggttcgac agcgacgcca       120
     cgagtccgag gaaggagccg cgggcgccat ggatagagca ggaggggccg gagtattggg       180
     accgggagac acagatctcc aagaccaaca cacagactta ccgagagagc ctgcggaacc       240
     tgcgcggcta ctacaaccag agcgaggccg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       300
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       360
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       420
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       480
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnggtctcac atcatccaga ggatgtatgg       540
     ctgcgacctg gggccggacg ggcgcctcct ccgcgggcat aaccagtacg cctacgacgg       600
     caaggattac atcgccctga acgaggacct gcgctcctgg accgccgcgg acacggcggc       660
     tcagatcacc cagcgcaagt gggaggcggc ccgtgtggcg gagcagctga gagcctacct       720
     ggagggcgag tgcgtggagt ggctccgcag atacctggag aacgggaagg agacgctgca       780
     gcgcgcgg                                                                788
//