ID GQ325308; SV 1; linear; genomic DNA; STD; HUM; 1669 BP.
XX
AC GQ325308;
XX
DT 28-JUL-2009 (Rel. 101, Created)
DT 28-JUL-2009 (Rel. 101, Last updated, Version 1)
XX
DE Homo sapiens MHC class I antigen (HLA-Cw) gene, HLA-Cw*050101v allele,
DE exons 2 through 4 and partial cds.
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-1669
RA Cao K., Wang Q., Semendyayeva M., Naim M., Lai C.-H., Ong G.,
RA Reinsmoen N.L.;
RT "A Novel Allele of Cw*050101 Variant Identified by Sequence-based Typing";
RL Unpublished.
XX
RN [2]
RP 1-1669
RA Cao K., Wang Q., Semendyayeva M., Naim M., Lai C.-H., Ong G.,
RA Reinsmoen N.L.;
RT ;
RL Submitted (24-JUN-2009) to the INSDC.
RL HLA Laboratory, Comprehensive Transplant Center, Cedars-Sinai Medical
RL Center, 8723 Alden Dr. SSB-197, Los Angeles, CA 90048, USA
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DR MD5; 8b5b8d28a34ad0b69f9cf9739df0ff13.
DR IMGT/HLA; HLA-C*05:01:05; HLA03978.
XX
FH Key Location/Qualifiers
FH
FT source 1..1669
FT /organism="Homo sapiens"
FT /isolate="CS00021"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene <1..>1669
FT /gene="HLA-Cw"
FT /allele="HLA-Cw*050101v"
FT mRNA join(<1..270,517..792,1394..>1669)
FT /gene="HLA-Cw"
FT /allele="HLA-Cw*050101v"
FT /product="HLA-Cw"
FT CDS join(<1..270,517..792,1394..>1669)
FT /codon_start=3
FT /gene="HLA-Cw"
FT /allele="HLA-Cw*050101v"
FT /product="MHC class I antigen"
FT /db_xref="InterPro:IPR001039"
FT /db_xref="InterPro:IPR003006"
FT /db_xref="InterPro:IPR003597"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR011161"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="InterPro:IPR037055"
FT /db_xref="UniProtKB/TrEMBL:C7EY82"
FT /protein_id="ACT75329.1"
FT /translation="SHSMRYFYTAVSRPGRGEPRFIAVGYVDDTQFVQFDSDAASPRGE
FT PRAPWVEQEGPEYWDRETQKYKRQAQTDRVNLRKLRGYYNQSEAGSHTLQRMYGCDLGP
FT DGRLLRGYNQFAYDGKDYIALNEDLRSWTAADKAAQITQRKWEAAREAEQRRAYLEGTC
FT VEWLRRYLENGKKTLQRAEHPKTHVTHHPVSDHEATLRCWALGFYPAEITLTWQRDGED
FT QTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPLTLRW"
FT exon <1..270
FT /gene="HLA-Cw"
FT /allele="HLA-Cw*050101v"
FT /number=2
FT gap 271..516
FT /estimated_length=246
FT exon 517..792
FT /gene="HLA-Cw"
FT /allele="HLA-Cw*050101v"
FT /number=3
FT gap 793..1393
FT /estimated_length=601
FT exon 1394..>1669
FT /gene="HLA-Cw"
FT /allele="HLA-Cw*050101v"
FT /number=4
XX
SQ Sequence 1669 BP; 178 A; 251 C; 282 G; 111 T; 847 other;
gctcccactc catgaggtat ttctacaccg ccgtgtcccg gcccggccgc ggagagcccc 60
gcttcatcgc agtgggctac gtggacgaca cgcagttcgt gcagttcgac agcgacgccg 120
cgagtccaag aggggagccg cgggcgccgt gggtggagca ggaggggccg gagtattggg 180
accgggagac acagaagtac aagcgccagg cacagactga ccgagtgaac ctgcggaaac 240
tgcgcggcta ctacaaccag agcgaggccg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 300
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 420
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 480
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnggtc tcacaccctc cagaggatgt 540
atggctgcga cctggggccc gacgggcgcc tcctccgcgg gtataaccag ttcgcctacg 600
acggcaagga ttacatcgcc ctgaatgagg acctgcgctc ctggaccgcc gcggacaagg 660
cggctcagat cacccagcgc aagtgggagg cggcccgtga ggcggagcag cggagagcct 720
acctggaggg cacgtgcgtg gagtggctcc gcagatacct ggagaacggg aagaagacgc 780
tgcagcgcgc ggnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 840
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 900
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 960
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1020
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1080
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1140
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1200
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1260
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1320
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1380
nnnnnnnnnn nnnaacaccc aaagacacac gtgacccacc atcccgtctc tgaccatgag 1440
gccaccctga ggtgctgggc cctgggcttc taccctgcgg agatcacact gacctggcag 1500
cgggatggcg aggaccaaac tcaggacacc gagcttgtgg agaccaggcc agcaggagat 1560
ggaaccttcc agaagtgggc agctgtggtg gtgccttctg gagaagagca gagatacaca 1620
tgccatgtgc agcacgaggg gctgccagag cccctcaccc tgagatggg 1669
//