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EBI Dbfetch

ID   GQ250941; SV 1; linear; genomic DNA; STD; HUM; 788 BP.
XX
AC   GQ250941;
XX
DT   19-JUL-2009 (Rel. 101, Created)
DT   27-APR-2012 (Rel. 112, Last updated, Version 2)
XX
DE   Homo sapiens MHC class I antigen (HLA-B) gene, HLA-B_4001 allele, exons 2,
DE   3 and partial cds.
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-788
RX   DOI; 10.1111/j.1399-0039.2011.01787.x.
RX   PUBMED; 22050210.
RA   Wowk P.F., Mattar S.B., Poerner F., de Rezende G.Y., Bicalho Mda G.;
RT   "Two novel alleles, HLA-B*40:125 and B*40:129, in the Brazilian
RT   population";
RL   Tissue Antigens 79(2):137-138(2012).
XX
RN   [2]
RP   1-788
RA   Bicalho M.G., Mattar S.B., Uehara C.J., Ribas F.;
RT   "HLA new alleles";
RL   Unpublished.
XX
RN   [3]
RP   1-788
RA   Bicalho M.G., Mattar S.B., Uehara C.J., Ribas F.;
RT   ;
RL   Submitted (03-JUN-2009) to the INSDC.
RL   Genetics, Federal University of Parana, Sala 31, Departamento de Genetica,
RL   Setor de Ciencias Biologicas, Centro Politecnico, Jardim das Americas
RL   CP19071, Curitiba, Parana 81530980, Brazil
XX
DR   MD5; 4c6ad8447841a86cadaf03f2075f5d5b.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..788
FT                   /organism="Homo sapiens"
FT                   /chromosome="6"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT   gene            <1..>788
FT                   /gene="HLA-B"
FT                   /allele="HLA-B_4001"
FT   mRNA            join(<1..270,513..>788)
FT                   /gene="HLA-B"
FT                   /allele="HLA-B_4001"
FT                   /product="MHC class I antigen"
FT   CDS             join(<1..270,513..>788)
FT                   /codon_start=3
FT                   /gene="HLA-B"
FT                   /allele="HLA-B_4001"
FT                   /product="MHC class I antigen"
FT                   /db_xref="GOA:C7E540"
FT                   /db_xref="IMGT/HLA:B*40:125"
FT                   /db_xref="InterPro:IPR001039"
FT                   /db_xref="InterPro:IPR011161"
FT                   /db_xref="InterPro:IPR011162"
FT                   /db_xref="InterPro:IPR027648"
FT                   /db_xref="UniProtKB/TrEMBL:C7E540"
FT                   /protein_id="ACT34383.1"
FT                   /translation="SHSMRYFHTAMSRPGRGEPRFITVGYVDDTLFVRFDSDATSPRKE
FT                   PRAPWIEQEGPEYWDRETQISKTNTQTYRESLRNLRGYYNQSEAGSHTLQRMYGCDLGP
FT                   DGRLLRGHNQYAYDGKDYIALNEDLRSWTAADTAAQISQRKLEAARVAEQLRAYLEGEC
FT                   VEWLRRYLENGKDKLERA"
FT   exon            1..270
FT                   /gene="HLA-B"
FT                   /allele="HLA-B_4001"
FT                   /number=2
FT   gap             271..512
FT                   /estimated_length=242
FT   exon            513..788
FT                   /gene="HLA-B"
FT                   /allele="HLA-B_4001"
FT                   /number=3
XX
SQ   Sequence 788 BP; 113 A; 172 C; 188 G; 73 T; 242 other;
     gctcccactc catgaggtat ttccacaccg ccatgtcccg gcccggccgc ggggagcccc        60
     gcttcatcac cgtgggctac gtggacgaca cgctgttcgt gaggttcgac agcgacgcca       120
     cgagtccgag gaaggagccg cgggcgccat ggatagagca ggaggggccg gagtattggg       180
     accgggagac acagatctcc aagaccaaca cacagactta ccgagagagc ctgcggaacc       240
     tgcgcggcta ctacaaccag agcgaggccg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       300
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       360
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       420
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       480
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnggtctcac accctccaga ggatgtatgg       540
     ctgcgacctg gggccggacg ggcgcctcct ccgcgggcat aaccagtacg cctacgacgg       600
     caaggattac atcgccctga acgaggacct gcgctcctgg accgccgcgg acacggcggc       660
     tcagatctcc cagcgcaagt tggaggcggc ccgtgtggcg gagcagctga gagcctacct       720
     ggagggcgag tgcgtggagt ggctccgcag atacctggag aacgggaagg acaagctgga       780
     gcgcgctg                                                                788
//


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