Dbfetch
ID GQ215661; SV 1; linear; genomic DNA; STD; HUM; 1022 BP. XX AC GQ215661; XX DT 02-JUN-2010 (Rel. 105, Created) DT 02-JUN-2010 (Rel. 105, Last updated, Version 1) XX DE Homo sapiens MHC class I antigen (HLA-A) gene, HLA-A*02 allele, exons 2 DE through 4 and partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-1022 RA Smith A.G., Sprague M., Regen L., Shenavar Y., Pereira S.; RT "A novel HLA-A*02 allele with an exon 4 polymorphism"; RL Unpublished. XX RN [2] RP 1-1022 RA Smith A.G., Sprague M., Regen L., Shenavar Y., Pereira S.; RT ; RL Submitted (27-MAY-2009) to the INSDC. RL Clinical Immunogenetics Lab, Seattle Cancer Care Alliance, 825 Eastlake RL Ave. E., Seattle, WA 98109, USA XX DR MD5; 5c6c66394c42d38a1c43807e3f13c308. DR IMGT/HLA; HLA-A*02:97:02; HLA03980. XX FH Key Location/Qualifiers FH FT source 1..1022 FT /organism="Homo sapiens" FT /chromosome="6" FT /map="6p21" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene 1..1022 FT /gene="HLA-A" FT /allele="HLA-A*02" FT mRNA join(<1..270,371..646,747..>1022) FT /gene="HLA-A" FT /allele="HLA-A*02" FT /product="MHC class I antigen" FT CDS join(<1..270,371..646,747..>1022) FT /codon_start=3 FT /gene="HLA-A" FT /allele="HLA-A*02" FT /product="MHC class I antigen" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:D7NMJ8" FT /protein_id="ADE18745.1" FT /translation="SHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRME FT PRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYGCDVGS FT DWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYLEGTC FT VEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEATLRCWALSFYPAEITLTWQRDGED FT QTQDTELVDTRPAGDGTFQKWAAVVVPSGQEQRYTCHVQHEGLPKPLTLRW" FT exon 1..270 FT /gene="HLA-A" FT /allele="HLA-A*02" FT /number=2 FT gap 271..370 FT /estimated_length=unknown FT exon 371..646 FT /gene="HLA-A" FT /allele="HLA-A*02" FT /number=3 FT gap 647..746 FT /estimated_length=unknown FT exon 747..1022 FT /gene="HLA-A" FT /allele="HLA-A*02" FT /number=4 XX SQ Sequence 1022 BP; 171 A; 244 C; 281 G; 126 T; 200 other; gctctcactc catgaggtat ttcttcacat ccgtgtcccg gcccggccgc ggggagcccc 60 gcttcatcgc agtgggctac gtggacgaca cgcagttcgt gcggttcgac agcgacgccg 120 cgagccagag gatggagccg cgggcgccgt ggatagagca ggagggtccg gagtattggg 180 acggggagac acggaaagtg aaggcccact cacagactca ccgagtggac ctggggaccc 240 tgcgcggcta ctacaaccag agcgaggccg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 300 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360 nnnnnnnnnn gttctcacac cgtccagagg atgtatggct gcgacgtggg gtcggactgg 420 cgcttcctcc gcgggtacca ccagtacgcc tacgacggca aggattacat cgccctgaaa 480 gaggacctgc gctcttggac cgcggcggac atggcagctc agaccaccaa gcacaagtgg 540 gaggcggccc atgtggcgga gcagttgaga gcctacctgg agggcacgtg cgtggagtgg 600 ctccgcagat acctggagaa cgggaaggag acgctgcagc gcacggnnnn nnnnnnnnnn 660 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 720 nnnnnnnnnn nnnnnnnnnn nnnnnnacgc ccccaaaacg catatgactc accacgctgt 780 ctctgaccat gaagccaccc tgaggtgctg ggccctgagc ttctaccctg cggagatcac 840 actgacctgg cagcgggatg gggaggacca gacccaggac acggagctcg tggataccag 900 gcctgcaggg gatggaacct tccagaagtg ggcggctgtg gtggtgcctt ctggacagga 960 gcagagatac acctgccatg tgcagcatga gggtttgccc aagcccctca ccctgagatg 1020 gg 1022 //