ID GQ214006; SV 1; linear; genomic DNA; STD; HUM; 1663 BP.
XX
AC GQ214006;
XX
DT 07-JUL-2009 (Rel. 101, Created)
DT 27-APR-2012 (Rel. 112, Last updated, Version 2)
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DE Homo sapiens isolate PT08-283 MHC class I antigen (HLA-A) gene,
DE HLA-A*330301 variant allele, exons 2 through 4 and partial cds.
XX
KW .
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OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-1663
RX DOI; 10.1111/j.1399-0039.2011.01793.x.
RX PUBMED; 22034849.
RA Joo S.Y., Song E.Y., Huh J.Y., Kang M.S., Park M.H.;
RT "HLA-A*33:25, a novel allele identified by sequence-based typing, is a
RT well-documented allele in Koreans";
RL Tissue Antigens 79(2):134-135(2012).
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RN [2]
RP 1-1663
RA Joo S.Y., Shin Y., Song E.Y., Park M.H.;
RT ;
RL Submitted (25-MAY-2009) to the INSDC.
RL Department of Laboratory Medicine, Seoul National University College of
RL Medicine, 101 Daehangno, Jongno-gu, Seoul 110-744, Korea
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DR MD5; 3b416874362a610c073260804e52169e.
DR IMGT/HLA; HLA-A*33:25; HLA03915.
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FH Key Location/Qualifiers
FH
FT source 1..1663
FT /organism="Homo sapiens"
FT /chromosome="6"
FT /map="6p21"
FT /isolate="PT08-283"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene <1..>1663
FT /gene="HLA-A"
FT /allele="HLA-A*330301 variant"
FT mRNA join(<1..270,512..787,1388..>1663)
FT /gene="HLA-A"
FT /allele="HLA-A*330301 variant"
FT /product="MHC class I antigen"
FT CDS join(<1..270,512..787,1388..>1663)
FT /codon_start=3
FT /gene="HLA-A"
FT /allele="HLA-A*330301 variant"
FT /product="MHC class I antigen"
FT /db_xref="InterPro:IPR001039"
FT /db_xref="InterPro:IPR003006"
FT /db_xref="InterPro:IPR003597"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR011161"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="InterPro:IPR037055"
FT /db_xref="UniProtKB/TrEMBL:C6KGV6"
FT /protein_id="ACS94261.1"
FT /translation="SHSMRYFTTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRME
FT PRAPWIEQEGPEYWDRNTRNVKAHSQIDRVDLGTLRGYYNQSEAGSHTIQMMYGCDVGS
FT DGRFLRGYQQDAYDGKDYIALNEDLRSWTAADMAAQITQRKWEAARVAEQLRAYLEGTC
FT VEWLRRYLENGKETLQRTDPPKTHMTHHAVSDHEATLRCWALSFYPAEITLTWQRDGED
FT QTQDTELVETRPTGDGTFQKWASVVVPSGQEQRYTCHVQHEGLPKPLTLRW"
FT exon 1..270
FT /gene="HLA-A"
FT /allele="HLA-A*330301 variant"
FT /number=2
FT gap 271..511
FT /estimated_length=241
FT exon 512..787
FT /gene="HLA-A"
FT /allele="HLA-A*330301 variant"
FT /number=3
FT gap 788..1387
FT /estimated_length=600
FT exon 1388..1663
FT /gene="HLA-A"
FT /allele="HLA-A*330301 variant"
FT /number=4
FT variation 1546
FT /gene="HLA-A"
FT /replace="g"
FT /note="compared to A*330301"
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SQ Sequence 1663 BP; 166 A; 249 C; 283 G; 124 T; 841 other;
gctcccactc catgaggtat ttcaccacat ccgtgtcccg gcccggccgc ggggagcccc 60
gcttcatcgc cgtgggctac gtggacgaca cgcagttcgt gcggttcgac agcgacgccg 120
cgagccagag gatggagccg cgggcgccgt ggatagagca ggaggggccg gagtattggg 180
accggaacac acggaatgtg aaggcccact cacagattga ccgagtggac ctggggaccc 240
tgcgcggcta ctacaaccag agcgaggccg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 300
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 420
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 480
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn ngttctcaca ccatccagat gatgtatggc 540
tgcgacgtgg ggtcggacgg gcgcttcctc cgcgggtacc agcaggacgc ctacgacggc 600
aaggattaca tcgccttgaa cgaggacctg cgctcttgga ccgcggcgga catggcggct 660
cagatcaccc agcgcaagtg ggaggcggcc cgtgtggcgg agcagttgag agcctacctg 720
gagggcacgt gcgtggagtg gctccgcaga tacctggaga acgggaagga gacgctgcag 780
cgcacggnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 840
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 900
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 960
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1020
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1080
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1140
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1200
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1260
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1320
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1380
nnnnnnnacc cccccaagac gcatatgact caccacgctg tctctgacca tgaggccacc 1440
ctgaggtgct gggccctgag cttctaccct gcggagatca cactgacctg gcagcgggat 1500
ggggaggacc agacccagga cacggagctc gtggagacca ggcctacagg ggatggaacc 1560
ttccagaagt gggcgtctgt ggtggtgcct tctggacagg agcagagata cacctgccat 1620
gtgcagcatg agggtctccc caagcccctc accctgagat ggg 1663
//