Dbfetch

ID   FR823454; SV 1; linear; genomic DNA; STD; HUM; 1225 BP.
XX
AC   FR823454;
XX
DT   01-MAR-2011 (Rel. 108, Created)
DT   01-MAR-2011 (Rel. 108, Last updated, Version 1)
XX
DE   Homo sapiens partial HLA-A gene for MHC class I antigen, allele HLA-A*26,
DE   exons 1-4
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-1225
RA   Anholts J.D.H.;
RT   ;
RL   Submitted (17-FEB-2011) to the INSDC.
RL   Anholts J.D.H., Immunohematology and Bloodtransfusion, Leiden University
RL   Medical Center, Albinusdreef 2, 2333 ZA, NETHERLANDS.
XX
RN   [2]
RA   Anholts J.D.H.;
RT   "New sequences found during routine HLA typing";
RL   Unpublished.
XX
DR   MD5; 8bc67234405af2908cace659921c29c1.
DR   IMGT/HLA; HLA-A*26:01:01:02; HLA13482.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1225
FT                   /organism="Homo sapiens"
FT                   /chromosome="6"
FT                   /mol_type="genomic DNA"
FT                   /cell_type="lymphocyte"
FT                   /tissue_type="blood"
FT                   /db_xref="taxon:9606"
FT   CDS             join(<1..73,204..473,574..849,950..>1225)
FT                   /codon_start=1
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*26"
FT                   /product="MHC class I antigen"
FT                   /function="antigen presenting molecule"
FT                   /db_xref="InterPro:IPR001039"
FT                   /db_xref="InterPro:IPR003006"
FT                   /db_xref="InterPro:IPR003597"
FT                   /db_xref="InterPro:IPR007110"
FT                   /db_xref="InterPro:IPR011161"
FT                   /db_xref="InterPro:IPR011162"
FT                   /db_xref="InterPro:IPR013783"
FT                   /db_xref="InterPro:IPR036179"
FT                   /db_xref="InterPro:IPR037055"
FT                   /db_xref="UniProtKB/TrEMBL:F0VRV7"
FT                   /protein_id="CBZ46994.1"
FT                   /translation="MAVMAPRTLVLLLSGALALTQTWAGSHSMRYFYTSVSRPGRGEPR
FT                   FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDRNTRNVKAHSQTDRANLGT
FT                   LRGYYNQSEDGSHTIQRMYGCDVGPDGRFLRGYQQDAYDGKDYIALNEDLRSWTAADMA
FT                   AQITQRKWETAHEAEQWRAYLEGRCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHE
FT                   ATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWASVVVPSGQEQRY
FT                   TCHVQHEGLPKPLTLRW"
FT   exon            <1..73
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*26"
FT                   /number=1
FT   intron          74..203
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*26"
FT                   /number=1
FT   exon            204..473
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*26"
FT                   /number=2
FT   gap             474..573
FT                   /estimated_length=unknown
FT   exon            574..849
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*26"
FT                   /number=3
FT   gap             850..949
FT                   /estimated_length=unknown
FT   exon            950..>1225
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*26"
FT                   /number=4
XX
SQ   Sequence 1225 BP; 194 A; 317 C; 370 G; 144 T; 200 other;
     atggccgtca tggcgccccg aaccctcgtc ctgctactct cgggggccct ggccctgacc        60
     cagacctggg cgggtgagtg cggggtcggg agggaaacgg cctctgtggg gagaagcaag       120
     gggcccgccc ggcgggggcg caggacccgg gaagccgcgc ctggaggagg gtcgggcggg       180
     tctcagctac tcctcgcccc caggctccca ctccatgagg tatttctaca cctccgtgtc       240
     ccggcccggc cgcggggagc cccgcttcat cgccgtgggc tacgtggacg acacgcagtt       300
     cgtgcggttc gacagcgacg ccgcgagcca gaggatggag ccgcgggcgc cgtggataga       360
     gcaggagggg ccggagtatt gggaccggaa cacacggaat gtgaaggccc actcacagac       420
     tgaccgagcg aacctgggga ccctgcgcgg ctactacaac cagagcgagg acgnnnnnnn       480
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       540
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnngttctca caccatccag aggatgtatg       600
     gctgcgacgt ggggccggac gggcgcttcc tccgcgggta ccagcaggac gcttacgacg       660
     gcaaggatta catcgccctg aacgaggacc tgcgctcttg gaccgcggcg gacatggcgg       720
     ctcagatcac ccagcgcaag tgggagacgg cccatgaggc ggagcagtgg agagcctacc       780
     tggagggccg gtgcgtggag tggctccgca gatacctgga gaacgggaag gagacgctgc       840
     agcgcacggn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       900
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnna cgcccccaag       960
     acgcatatga ctcaccacgc tgtctctgac catgaggcca ccctgaggtg ctgggccctg      1020
     agcttctacc ctgcggagat cacactgacc tggcagcggg atggggagga ccagacccag      1080
     gacacggagc tcgtggagac caggcctgca ggggatggga ccttccagaa gtgggcgtct      1140
     gtggtggtgc cttctggaca ggagcagaga tacacctgcc atgtgcagca tgagggtctg      1200
     cccaagcccc tcaccctgag atggg                                            1225
//