Dbfetch
ID FR675926; SV 1; linear; genomic DNA; STD; HUM; 3034 BP. XX AC FR675926; XX DT 03-AUG-2010 (Rel. 105, Created) DT 03-AUG-2010 (Rel. 105, Last updated, Version 1) XX DE Homo sapiens HLA-C gene for MHC class I antigen, allele HLA-C*03, clone DE D10006833, exons 1-8 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3034 RA Qu J.; RT ; RL Submitted (02-AUG-2010) to the INSDC. RL Qu J., Bei Shan Industrial Zone, Yantian District, Shenzhen, CHINA. XX RN [2] RA Qu J., Chen H., Wang L., Liao K., Zheng Z., Huang C., Li J., Hu Z., RA Zhang H., Shen M.; RT "Identification novel alleles of HLA genes"; RL Unpublished. XX DR MD5; 99e13ee46eceaa60fe5084f320894a2d. DR IMGT/HLA; HLA-C*03:100; HLA05788. XX FH Key Location/Qualifiers FH FT source 1..3034 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="D10006833" FT /db_xref="taxon:9606" FT CDS join(29..101,232..501,747..1022,1610..1885,2007..2126, FT 2566..2589,2706..2753,2918..2922) FT /gene="HLA-C" FT /allele="HLA-C*03" FT /product="MHC class I antigen" FT /db_xref="GOA:D9UB02" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:D9UB02" FT /protein_id="CBW44114.1" FT /translation="MRVMAPRTLILLLSGALALTETWAGSHSMRYFYTAVSRPGRGEPH FT FIAVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQTDRVSLRN FT LRGYYNQSEAGSHIIQRMYGCDVGPDGRLLRGYDQYAYDGKDYIALNEDLRSWTAADTA FT AQITQRKWEAAREAEQLRAYLEGLCVEWLRRYLKNGKETLQRAEHPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQWDGEDQIQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPEPLTLRWEPSSQPTIPIVGIVAGLAVLAVLAVLGAVVAVVMCRRKSSGG FT KGGSCSPSNSAQGSDESLIACKA" FT exon 29..101 FT /gene="HLA-C" FT /allele="HLA-C*03" FT /number=1 FT intron 102..231 FT /gene="HLA-C" FT /allele="HLA-C*03" FT /number=1 FT exon 232..501 FT /gene="HLA-C" FT /allele="HLA-C*03" FT /number=2 FT intron 502..746 FT /gene="HLA-C" FT /allele="HLA-C*03" FT /number=2 FT exon 747..1022 FT /gene="HLA-C" FT /allele="HLA-C*03" FT /number=3 FT intron 1023..1609 FT /gene="HLA-C" FT /allele="HLA-C*03" FT /number=3 FT exon 1610..1885 FT /gene="HLA-C" FT /allele="HLA-C*03" FT /number=4 FT intron 1886..2006 FT /gene="HLA-C" FT /allele="HLA-C*03" FT /number=4 FT exon 2007..2126 FT /gene="HLA-C" FT /allele="HLA-C*03" FT /number=5 FT intron 2127..2565 FT /gene="HLA-C" FT /allele="HLA-C*03" FT /number=5 FT exon 2566..2589 FT /gene="HLA-C" FT /allele="HLA-C*03" FT /number=6 FT intron 2590..2705 FT /gene="HLA-C" FT /allele="HLA-C*03" FT /number=6 FT exon 2706..2753 FT /gene="HLA-C" FT /allele="HLA-C*03" FT /number=7 FT intron 2754..2917 FT /gene="HLA-C" FT /allele="HLA-C*03" FT /number=7 FT exon 2918..2922 FT /gene="HLA-C" FT /allele="HLA-C*03" FT /number=8 XX SQ Sequence 3034 BP; 567 A; 864 C; 968 G; 635 T; 0 other; cggactcaga ttctccccag acgccgagat gcgggtcatg gcgccccgaa ccctcatcct 60 gctgctctcg ggagccctgg ccctgaccga gacctgggcc ggtgagtgcg gggttgggag 120 ggaatcggcc tctgcggaga ggagcgaggg gcccgcccgg cgagggcgca ggacccgggg 180 agccgcgcag ggaggagggt cgggcgggtc tcagcccctc ctcgccccca ggctcccact 240 ccatgaggta tttctacacc gctgtgtccc ggcccggccg cggggagccc cacttcatcg 300 cagtgggcta cgtggacgac acgcagttcg tgcggttcga cagcgacgcc gcgagtccga 360 gaggggagcc gcgggcgccg tgggtggagc aggaggggcc ggagtattgg gaccgggaga 420 cacagaagta caagcgccag gcacagactg accgagtgag cctgcggaac ctgcgcggct 480 actacaacca gagcgaggcc ggtgagtgac cccggcccgg ggcgcaggtc acgacccctc 540 ctcatccccc acggacggcc cgggtcgccc caagtctccc ggtctgagat ccaccccgag 600 gctgcggaac ccgcccagac cctcgaccgg agagagcccc agtcaccttt acccggtttc 660 attttcagtt taggccaaaa tccccgcggg ttggtcgggg cggggcgggg ctcgggggac 720 ggggctgacc gcgggggcgg ggccagggtc tcacatcatc cagaggatgt atggctgcga 780 cgtggggccc gacgggcgcc tcctccgcgg gtatgaccag tacgcctacg acggcaagga 840 ttacatcgcc ctgaacgagg atctgcgctc ctggaccgcc gcggacacgg cggctcagat 900 cacccagcgc aagtgggagg cggcccgtga ggcggagcag ctgagagcct acctggaggg 960 cctgtgcgtg gagtggctcc gcagatacct gaagaatggg aaggagacgc tgcagcgcgc 1020 gggtaccagg ggcagtgggg agccttcccc atctcctgta gatctcccgg gatggcctcc 1080 cacgaggagg ggaggaaaat gggatcagcg ctagaatatc gccctccctt gaatggagaa 1140 tgggatgagt tttcctgagt ttcctctgag ggccccctct gctctctagg acaattaagg 1200 gatgaagtcc ttgaggaaat ggaggggaag acagtcccta gaatactgat caggggtccc 1260 ctttgaccac tttgaccact gcagcagctg tggtcaggct gctgaccttt ctctcaggcc 1320 ttgttctctg cctcacgctc aatgtgtttg aaggtttgat tccagctttt ctgagtcctt 1380 cggcctccac tcaggtcagg accagaagtc gctgttcctc cctcagagac tagaactttc 1440 caatgaatag gagattatcc caggtgcctg tgtccaggct ggcgtctggg ttctgtgccc 1500 ccttccccac cccaggtgtc ctgtccgttc tcaggatggt cacatgggcg ctgttggagt 1560 gtcgcaagag agatacaaag tgtctgaatt ttctgactct tcccgtcaga acacccaaag 1620 acacacgtga cccaccatcc cgtctctgac catgaggcca ccctgaggtg ctgggccctg 1680 ggcttctacc ctgcggagat cacactgacc tggcagtggg atggggagga ccaaattcag 1740 gacactgagc ttgtggagac caggccagca ggagatggaa ccttccagaa gtgggcagct 1800 gtggtggtgc cttctggaga agagcagaga tacacgtgcc atgtgcagca cgaggggctg 1860 ccggagcccc tcaccctgag atggggtaag gagggggatg aggggtgatg tgtcttctca 1920 gggaaagcag aagtcctgga gcccttcagc caggtcaggg ctgaggcttg ggggtcaggg 1980 cccctcacct tcccctcctt tcccagagcc gtcttcccag cccaccatcc ccatcgtggg 2040 catcgttgct ggcctggctg tcctggctgt cctagctgtc ctaggagctg tggtggctgt 2100 tgtgatgtgt aggaggaaga gctcaggtag ggaaggggtg aggagtgggg tctgggtttt 2160 cttgttccac tgggagtttc aagccccagg tagaagtgtg ccccacctcg ttactggaag 2220 caccatccac acatgggcca tcccagcctg ggaccctgtg tgccagcact tactctgttg 2280 tgaagcacat gacaatgaag gacagatgta tcaccttgat gattatggtg ttggggtcct 2340 tgattccagc attcatgagt caggggaagg tccctgctaa ggacagacct taggagggca 2400 gttgctccag aacccacagc tgctttcccc gtgtttcctg atcctgccct gggtctgcag 2460 tcatagttct ggaaacttct cttgggtcca agactaggag gttcccctaa gatcgcatgg 2520 ccctgactcc tccctgtccc ctcacagggc attttcttcc cacaggtgga aaaggaggga 2580 gctgctctca ggctgcgtgt aagtgatggc ggtgggcgtg tggaggagct cacccacccc 2640 ataattcctc ttgtcccaca tctcctgcgg gctctgacca ggtctttttt tttgttctac 2700 cccagccagc aacagtgccc agggctctga tgagtctctc atcgcttgta aaggtgagat 2760 tctggggagc tgaagtggtc gggggtgggg cagagggaaa aggcctaggt aatggggatc 2820 ctttgattgg gacgtttcga atgtgtggtg agctgttcag agtgtgatca cttaccatga 2880 ctgacctgaa tttgttcatg actattgtgt tctgtagcct gagacagctg cctgtgtggg 2940 actgagatgc aggatttctt cacacctctc ctttgtgact tcaagagcct ctggcatctc 3000 tttctgcaaa ggcatctgaa tgtgtctgcg ttcc 3034 //