Dbfetch
ID FN908171; SV 1; linear; genomic DNA; STD; HUM; 3058 BP. XX AC FN908171; XX DT 10-JUN-2010 (Rel. 105, Created) DT 10-JUN-2010 (Rel. 105, Last updated, Version 1) XX DE Homo sapiens HLA-C gene for MHC class I antigen, allele HLA-C*040101 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3058 RA Qu J.; RT ; RL Submitted (03-JUN-2010) to the INSDC. RL Qu J., Bei Shan Industrial Zone, Yantian District, Shenzhen, CHINA. XX RN [2] RA Qu J.; RT "full length of HLA-C, alleles"; RL Unpublished. XX DR MD5; 5f1c7d679cd5c3f3110db5fe628cd613. DR IMGT/HLA; HLA-C*04:70; HLA05414. XX FH Key Location/Qualifiers FH FT source 1..3058 FT /organism="Homo sapiens" FT /isolate="D10000511" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT CDS join(107..179,310..579,826..1101,1689..1964,2086..2205, FT 2645..2677,2785..2832,2997..3001) FT /gene="HLA-C" FT /allele="HLA-C*040101" FT /product="MHC class I antigen" FT /db_xref="GOA:D7GN69" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:D7GN69" FT /protein_id="CBM42642.1" FT /translation="MRVMAPRTLILLLSGALALTETWAGSHSMRYFSTSVSWPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPRGEPREPWMEQEGPEYWDRETQKYKRQAQADRVNLRK FT LRGYYNQSEDGSHTLQRMFGCDLGPDGRLLRGYNQFAYDGKDYIALNEDLRSWTAADTA FT AQITQRKWEAAREAEQRRAYLEGTCVEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQWDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPEPLTLRWKPSSQPTIPIVGIVAGLAVLAVLAVLGAMVAVVMCRRKSSGG FT KGGSCSQAASSNSAQGSDESLIACKA" FT exon <107..179 FT /gene="HLA-C" FT /allele="HLA-C*040101" FT /number=1 FT intron 180..309 FT /gene="HLA-C" FT /allele="HLA-C*040101" FT /number=1 FT exon 310..579 FT /gene="HLA-C" FT /allele="HLA-C*040101" FT /number=2 FT intron 580..825 FT /gene="HLA-C" FT /allele="HLA-C*040101" FT /number=2 FT exon 826..1101 FT /gene="HLA-C" FT /allele="HLA-C*040101" FT /number=3 FT intron 1102..1688 FT /gene="HLA-C" FT /allele="HLA-C*040101" FT /number=3 FT exon 1689..1964 FT /gene="HLA-C" FT /allele="HLA-C*040101" FT /number=4 FT intron 1965..2085 FT /gene="HLA-C" FT /allele="HLA-C*040101" FT /number=4 FT exon 2086..2205 FT /gene="HLA-C" FT /allele="HLA-C*040101" FT /number=5 FT intron 2206..2644 FT /gene="HLA-C" FT /allele="HLA-C*040101" FT /number=5 FT exon 2645..2677 FT /gene="HLA-C" FT /allele="HLA-C*040101" FT /number=6 FT intron 2678..2784 FT /gene="HLA-C" FT /allele="HLA-C*040101" FT /number=6 FT exon 2785..2832 FT /gene="HLA-C" FT /allele="HLA-C*040101" FT /number=7 FT intron 2833..2996 FT /gene="HLA-C" FT /allele="HLA-C*040101" FT /number=7 FT exon 2997..>3001 FT /gene="HLA-C" FT /allele="HLA-C*040101" FT /number=8 XX SQ Sequence 3058 BP; 579 A; 880 C; 967 G; 632 T; 0 other; ctcccattgg gtgtcgggtt ctagagaagc caatcagcgt ctccgcagtc ccggttctaa 60 agtccccagt cacccacccg gactcagatt ctccccagac gccgagatgc gggtcatggc 120 gccccgaacc ctcatcctgc tgctctcggg agccctggcc ctgaccgaga cctgggccgg 180 tgagtgcggg gttgggaggg aaacggcctc tggggagagg agcgaggggc ccgcccggcg 240 agggcgcagg acccggggag ccgcgcaggg aggagggtcg ggcgggtctc agccactcct 300 cgtccccagg ctcccactcc atgaggtatt tctccacatc cgtgtcctgg cccggccgcg 360 gggagccccg cttcatcgca gtgggctacg tggacgacac gcagttcgtg cggttcgaca 420 gcgacgccgc gagtccaaga ggggagccgc gggagccgtg gatggagcag gaggggccgg 480 agtattggga ccgggagaca cagaagtaca agcgccaggc acaggctgac cgagtgaacc 540 tgcggaaact gcgcggctac tacaaccaga gcgaggacgg tgagtgaccc cggcccgggg 600 cgcaggtcac gacccctccc catcccccac ggacggcccg ggtcgccccg agtctccccg 660 tctgagatcc accccgaggc tgcggaaccc gcccagaccc tcgaccggag agagccccag 720 tcacctttac ccggtttcat tttcagttta ggccaaaatc cccgcgggtt ggtcgggact 780 ggggcggggc tcgggggacc gggctgacca cgggggcggg gccagggtct cacaccctcc 840 agaggatgtt tggctgcgac ctggggccgg acgggcgcct cctccgcggg tataaccagt 900 tcgcctacga cggcaaggat tacatcgccc tgaacgagga tctgcgctcc tggaccgccg 960 cggacacggc ggctcagatc acccagcgca agtgggaggc ggcccgtgag gcggagcagc 1020 ggagagccta cctggagggc acgtgcgtgg agtggctccg cagatacctg gagaacggga 1080 aggagacgct gcagcgcgcg ggtaccaggg gcagtgggga gccttcccca tctcccgtag 1140 atctcccggg atggcctccc acgaggaggg gaggaaaatg ggatcagcgc tagaatatcg 1200 ccctcccttg aatggagaat gggatgagtt ttcctgagtt tcctctgagg gccccctctg 1260 ctctctagga caattaaggg atgaagtcct tgaggaaatg gaggggaaga cagtccctgg 1320 aatactgatc aggggtcccc tttgaccact ttgaccactg cagcagctgt ggtcaggctg 1380 ctgacctttc tctcaggcct tgttctctgc ctgacgctca atgtgtttga aggtttgatt 1440 ccagcttttc tgagtccttc ggcctccact caggtcagga ccagaagtcg ctgttcctcc 1500 ctcagagact agaactttcc aatgaatagg agattatccc aggtgcctgt gtccaggctg 1560 gcgtctgggt tctgtgcccc cttccccacc ccaggtgtcc tgtccattct caggatggtc 1620 acatgggcgc tgttggagtg tcgcaagaga gatacaaagt gtctgaattt tctgactctt 1680 cccatcagaa cacccaaaga cacacgtgac ccaccatccc gtctctgacc atgaggccac 1740 cctgaggtgc tgggccctgg gcttctaccc tgcggagatc acactgacct ggcagtggga 1800 tggggaggac caaactcagg acaccgagct tgtggagacc aggccagcag gagatggaac 1860 cttccagaag tgggcagctg tggtggtgcc ttctggagaa gagcagagat acacgtgcca 1920 tgttcagcac gaggggctgc cggagcccct caccctgaga tggagtaagg agggggatga 1980 ggggtgatgt gtcttctcag ggaaagcaga agtcctggag cccttcagcc gggtcagggc 2040 tgaggcttgg aggtcagggc ccctcacctt cccctccttt cccagagccg tcttcccagc 2100 ccaccatccc catcgtgggc atcgttgctg gcctggctgt cctggctgtc ctagctgtcc 2160 taggagctat ggtggctgtt gtgatgtgta ggaggaagag ctcaggtagg gaaggggtga 2220 ggagtggggt ctgggttttc ttgttccact gggagtttca agccccaggt agaagtgtgc 2280 cccacctcgt tactggaagc accatccaca catgggccat cccagcctgg gaccctgtgt 2340 gccagcactt actctgttgt gaagcacatg acaatgaagg acagatgtat caccttgatg 2400 attatggtgt tggggtcctt gattccagca ttcatgagtc aggggaaggt ccctgctaag 2460 gacagacctt aggagggcag ttgcttcaga acccacagct gctttccccg tgtttcctga 2520 tcctgccctg ggtctgcagt catagttctg gaaacttctc ttgggtccaa gactaggagg 2580 ttcccctaag atcgcatggc cctgcctcct ccctgtcccc tcacagggca ttttcttccc 2640 acaggtggaa aaggagggag ctgctctcag gctgcgtgta agtgatggcg gtgggcgtgt 2700 ggaggagctc acccacccca taattcctct tgtcccacat ctcctgcggg ctctgaccag 2760 gtcttttttt ttgttctacc ccagccagca acagtgccca gggctctgat gagtctctca 2820 tcgcttgtaa aggtgagatt ctggggagct gaagtggtcg ggggtggggc agagggaaaa 2880 ggcctaggta atggggatcc tttgattggg acgtttcgaa tgtgtggtga gctgttcaga 2940 gtgtcatcac ttaccatgac tgacctgaat ttgttcatga ctattgtgtt ctgtagcctg 3000 agacagctgc ctgtgtggga ctgagatgca ggatttcttc acacctctcc tttgtgac 3058 //