Dbfetch

ID   FN908170; SV 1; linear; genomic DNA; STD; HUM; 2987 BP.
XX
AC   FN908170;
XX
DT   10-JUN-2010 (Rel. 105, Created)
DT   10-JUN-2010 (Rel. 105, Last updated, Version 1)
XX
DE   Homo sapiens HLA-C pseudogene, allele HLA-C*06020101
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-2987
RA   Qu J.;
RT   ;
RL   Submitted (03-JUN-2010) to the INSDC.
RL   Qu J., Bei Shan Industrial Zone, Yantian District, Shenzhen, CHINA.
XX
RN   [2]
RA   Qu J.;
RT   "full length of HLA-C, alleles";
RL   Unpublished.
XX
DR   MD5; 1276d9ecb257086ba85fb1dff231b2d1.
DR   IMGT/HLA; C*06:46N; HLA05526.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2987
FT                   /organism="Homo sapiens"
FT                   /isolate="D10000220"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT   CDS             join(48..120,251..520,767..1042,1630..1905,2027..2146,
FT                   2586..2618,2726..2773,2938..2942)
FT                   /pseudo
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*06020101"
FT   exon            <48..120
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*06020101"
FT                   /number=1
FT   intron          121..250
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*06020101"
FT                   /number=1
FT   exon            251..520
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*06020101"
FT                   /number=2
FT   intron          521..766
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*06020101"
FT                   /number=2
FT   exon            767..1042
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*06020101"
FT                   /number=3
FT   intron          1043..1629
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*06020101"
FT                   /number=3
FT   exon            1630..1905
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*06020101"
FT                   /number=4
FT   intron          1906..2026
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*06020101"
FT                   /number=4
FT   exon            2027..2146
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*06020101"
FT                   /number=5
FT   intron          2147..2585
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*06020101"
FT                   /number=5
FT   exon            2586..2618
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*06020101"
FT                   /number=6
FT   intron          2619..2725
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*06020101"
FT                   /number=6
FT   exon            2726..2773
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*06020101"
FT                   /number=7
FT   intron          2774..2937
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*06020101"
FT                   /number=7
FT   exon            2938..>2942
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*06020101"
FT                   /number=8
XX
SQ   Sequence 2987 BP; 561 A; 866 C; 949 G; 611 T; 0 other;
     aagtccccag tcacccaccc ggactcggat tctccccaga cgccgagatg cgggtcatgg        60
     cgccccgaac cctcatcctg ctgctctcgg gagccctggc cctgaccgag acctgggcct       120
     gtgagtgcgg ggttgggagg gaaacggcct ctgcggagag gagcgagggg cccgcccggc       180
     gagggcgcag gacccgggga gccgcgcagg gaggtgggtc gggcgggtct cagcccctcc       240
     tcgcccccag gctcccactc catgaggtat ttcgacaccg ccgtgtcccg gcccggccgc       300
     ggagagcccc gcttcatctc agtgggctac gtggacgaca cgcagttcgt gcggttcgac       360
     agcgacgccg cgagtccgag aggggagccc cgggcgccgt gggtggagca ggaggggccg       420
     gagtattggg accgggagac acagaagtac aagcgccagg cacaggctga ccgagtgaac       480
     ctgcggaaac tgcgcggcta ctacaaccag agcgaggacg gtgagtgacc ccggcccggg       540
     gcgcaggtca cgacccctcc ccatccccca cggacggccc gggtcgcccc gagtctcccg       600
     gtctgagatc caccccgagg ctgcggaacc cgcccagacc ctcgaccgga gagagcccca       660
     gtcaccttta cccggtttca ttttcagttt aggccaaaat ccccgcgggt tggtcggggc       720
     tggggcgggg ctcgggggac ggggctgacc acgggggcgg ggccagggtc tcacaccctc       780
     cagtggatgt atggctgcga cctggggccc gacgggcgcc tcctccgcgg gtatgaccag       840
     tccgcctacg acggcaagga ttacatcgcc ctgaacgagg acctgcgctc ctggaccgcc       900
     gcggacacgg cggctcagat cacccagcgc aagtgggagg cggcccgtga ggcggagcag       960
     tggagagcct acctggaggg cacgtgcgtg gagtggctcc gcagatacct ggagaacggg      1020
     aaggagacgc tgcagcgcgc gggtaccagg ggcagtgggg agccttcccc atctcctgta      1080
     gatctcccgg gatggcctcc cacgaggagg ggaggaaaat gggatcagcg ctagaatatc      1140
     gccctccctt gaatggagaa tgggatgagt tttcctgagt ttcctctgag ggccccctct      1200
     gctctctagg acaattaagg gatgaagtcc ttgaggaaat ggaggggaag acagtccctg      1260
     gaatactgat caggggtccc ctttgaccac tttgaccact gcagcagctg tggtcaggct      1320
     gctgaccttt ctctcaggcc ttgttctctg cctcacgctc aatgtgttta aaggtttgat      1380
     tccagctttt ctgagtcctt cggcctccac tcaggtcagg accagaagtc gctgttcctc      1440
     cctcagagac tagaactttc caatgaatag gagattatcc caggtgcctg tgtccaggct      1500
     ggcgtctggg ttctgtgccc ccttccccac cccaggtgtc ctgtccattc tcaggatggt      1560
     cacatgggtg ctgttggagt gtcgcaagag agatacaaag tgtctgaatt ttctgactct      1620
     tcccgtcaga acacccaaag acacacgtga cccaccatcc cgtctctgac catgaggcca      1680
     ccctgaggtg ctgggccctg ggcttctacc ctgcggagat cacactgacc tggcagcggg      1740
     atggcgagga ctaaactcag gacaccgagc ttgtggagac caggccagca ggagatggaa      1800
     ccttccagaa gtgggcagct gtggtggtgc cttctggaga agagcagaga tacacgtgcc      1860
     atgtgcagca cgaggggctg ccagagcccc tcaccctgag atggggtaag gagggggatg      1920
     aggggtcatg tgtcttctca gggaaagcag aagtcctgga gcccttcagc cgggtcaggg      1980
     ctgaggcttg ggggtcaggg cccctcacct tcccctcctt tcccagagcc atcttcccag      2040
     cccaccatcc ccatcgtggg catcgttgct ggcctggctg tcctggctgt cctagctgtc      2100
     ctaggagctg tgatggctgt tgtgatgtgt aggaggaaga gctcaggtag ggaaggggtg      2160
     aggagtgggg tctgggtttt cttgtcccac tgggagtttc aagccccagg tagaagtgtg      2220
     ccccacctcg ttactggaag caccatccac acatgggcca tcccagcctg ggaccctgtg      2280
     tgctagcact tactctgttg tgaagcacat gacaatgaag gacagatgta tcaccttgat      2340
     gattatggtg ttggggtcct tgattccagc attcatgagt caggggaagg tccctgctaa      2400
     ggacagacct taggagggca gttgctccag aacccacagc tgctttcccc gtgtttcctg      2460
     atcctgccct gggtctgcag tcatagttct ggaaacttct cttgggtcca agactaggag      2520
     gttcccctaa gatcgcatgg ccctgcctcc tccctgtccc ctcacagggc attttcttcc      2580
     cacaggtgga aaaggaggga gctgctctca ggctgcgtgt aagtgatggc ggtgggcgtg      2640
     tggaggagct cacccacccc ataattcctc ttgtcccaca tctcctgcgg gctctgacca      2700
     ggtctttttt tttgttctac cccagccagc aacagtgccc agggctctga tgagtctctc      2760
     atcgcttgta aaggtgagat tctggggagc tgaagtggtc tggggtgggg cagagggaaa      2820
     aggcctaggt aatggggatc ctttgattgg gacgtttcga atgtgtggtg agctgttcag      2880
     agtgtcatca cttaccatga ctgacctgaa tttgttcatg actattgtgt tctgtagcct      2940
     gagacagctg cctgtgtggg actgagatgc aggatttctt cacacct                    2987
//