Dbfetch
ID FN820510; SV 1; linear; genomic DNA; STD; HUM; 2689 BP. XX AC FN820510; XX DT 09-MAY-2010 (Rel. 104, Created) DT 09-MAY-2010 (Rel. 104, Last updated, Version 1) XX DE Homo sapiens HLA-B gene for MHC class I antigen, allele HLA-B*580101, exons DE 1-7 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-2689 RA Qu J.; RT ; RL Submitted (30-APR-2010) to the INSDC. RL Qu J., Yantian District, Bei Shan Industrial Zone, Shenzhen, CHINA. XX RN [2] RA Qu J.; RT "Identification of novel HLA alleles"; RL Unpublished. XX DR MD5; f767863cef7048fae33a69db2a67ffef. DR IMGT/HLA; HLA-B*58:01:06; HLA05370. XX FH Key Location/Qualifiers FH FT source 1..2689 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT CDS join(1..73,203..472,718..993,1569..1844,1949..2065, FT 2507..2539,2646..2689) FT /gene="HLA-B" FT /allele="HLA-B*580101" FT /product="MHC class I antigen" FT /db_xref="GOA:Q5QT34" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:Q5QT34" FT /protein_id="CBL87046.1" FT /translation="MRVTAPRTVLLLLWGAVALTETWAGSHSMRYFYTAMSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPRTEPRAPWIEQEGPEYWDGETRNMKASAQTYRENLRI FT ALRYYNQSEAGSHIIQRMYGCDLGPDGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAARVAEQLRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAVVVIGAVVATVMCRRKSSGGK FT GGSYSQAASSDSAQGSDVSLTA" FT exon <1..73 FT /gene="HLA-B" FT /allele="HLA-B*580101" FT /number=1 FT intron 74..202 FT /gene="HLA-B" FT /allele="HLA-B*580101" FT /number=1 FT exon 203..472 FT /gene="HLA-B" FT /allele="HLA-B*580101" FT /number=2 FT intron 473..717 FT /gene="HLA-B" FT /allele="HLA-B*580101" FT /number=2 FT exon 718..993 FT /gene="HLA-B" FT /allele="HLA-B*580101" FT /number=3 FT intron 994..1568 FT /gene="HLA-B" FT /allele="HLA-B*580101" FT /number=3 FT exon 1569..1844 FT /gene="HLA-B" FT /allele="HLA-B*580101" FT /number=4 FT intron 1845..1948 FT /gene="HLA-B" FT /allele="HLA-B*580101" FT /number=4 FT exon 1949..2065 FT /gene="HLA-B" FT /allele="HLA-B*580101" FT /number=5 FT intron 2066..2506 FT /gene="HLA-B" FT /allele="HLA-B*580101" FT /number=5 FT exon 2507..2539 FT /gene="HLA-B" FT /allele="HLA-B*580101" FT /number=6 FT intron 2540..2645 FT /gene="HLA-B" FT /allele="HLA-B*580101" FT /number=6 FT exon 2646..>2689 FT /gene="HLA-B" FT /allele="HLA-B*580101" FT /number=7 XX SQ Sequence 2689 BP; 494 A; 798 C; 862 G; 535 T; 0 other; atgcgggtca cggcgccccg aaccgtcctc ctgctgctct ggggggcagt ggccctgacc 60 gagacctggg ccggtgagtg cggggtcggg agggaaatgg cctctgtggg gaggagcgag 120 gggaccgcag gcgggggcgc aggacctgag gagccgcgcc gggaggaggg tcgggcgggt 180 ctcagcccct cctcgccccc aggctcccac tccatgaggt atttctacac cgccatgtcc 240 cggcccggcc gcggggagcc ccgcttcatc gcagtgggct acgtggacga cacccagttc 300 gtgaggttcg acagcgacgc cgcgagtccg aggacggagc cccgggcgcc atggatagag 360 caggaggggc cggagtattg ggacggggag acacggaaca tgaaggcctc cgcgcagact 420 taccgagaga acctgcggat cgcgctccgc tactacaacc agagcgaggc cggtgagtga 480 ccccggcccg gggcgcaggt cacgactccc catcccccac gtacggcccg ggtcgccccg 540 agtctccggg tccgagatcc gcctccctga ggccgcggga cccgcccaga ccctcgaccg 600 gcgagagccc caggcgcgtt tacccggttt cattttcagt tgaggccaaa atccccgcgg 660 gttggtcggg gcggggcggg gctcggggga cggggctgac cgcggggccg gggccagggt 720 ctcacatcat ccagaggatg tatggctgcg acctggggcc cgacgggcgc ctcctccgcg 780 ggcatgacca gtccgcctac gacggcaagg attacatcgc cctgaacgag gacctgagct 840 cctggaccgc ggcggacacc gcggctcaga tcacccagcg caagtgggag gcggcccgtg 900 tggcggagca gctgagagcc tacctggagg gcctgtgcgt ggagtggctc cgcagatacc 960 tggagaacgg gaaggagacg ctgcagcgcg cgggtaccag gggcagtggg gagccttccc 1020 catctcctat aggtcgccgg ggatggcctc ccacgagaag aggaggaaaa tgggatcagc 1080 gctagaatgt cgccctccct tgaatggaga atggcatgag ttttcctgag tttcctctga 1140 gggccccctc ttctctctag gacaattaag ggatgacgtc tctgaggaaa tggaggggaa 1200 gacagtccct agaatactga tcaggggtcc cctttgaccc ctgcagcagc cttgggaacc 1260 gtgacttttc ctctcaggcc ttgttctctg cctcacactc agtgtgtttg gggctctgat 1320 tccagcactt ctgagtcact ttacctccac tcagatcagg agcagaagtc cctgttcccc 1380 gctcagagac tcgaactttc caatgaatag gagattatcc caggtgcctg cgtccaggct 1440 ggtgtctggg ttctgtgccc cttccccaca ccaggtgtcc tgtccattct caggctggtc 1500 acatgggtgg tcctagggtg tcccatgaga gatgcaaagc gcctgaattt tctgactctt 1560 cccatcagac cccccaaaga cacacgtgac ccaccacccc gtctctgacc atgaggccac 1620 cctgaggtgc tgggccctgg gcttctaccc tgcggagatc acactgacct ggcagcggga 1680 tggcgaggac caaactcagg acactgagct tgtggagacc agaccagcag gagatagaac 1740 cttccagaag tgggcagctg tggtggtgcc ttctggagag gagcagagat acacatgcca 1800 tgtacagcat gaggggctgc cgaagcccct caccctgaga tggggtaagg agggggatga 1860 ggggtcatat ctcttctcag ggaaagcagg agcccttctg gagcccttca gcagggtcag 1920 ggcccctcgt cttcccctcc tttcccagag ccatcttccc agtccaccat ccccatcgtg 1980 ggcattgttg ctggcctggc tgtcctagca gttgtggtca tcggagctgt ggtcgctact 2040 gtgatgtgta ggaggaagag ctcaggtagg gaaggggtga ggggtggggt ctgggttttc 2100 ttgtcccact gggggtttca agccccaggt agaagtgttc cctgcctcat tactgggaag 2160 cagcatccac acaggggcta acgcagcctg ggaccctgtg tgccagcact tactcttttg 2220 tgcagcacat gtgacaatga aggacggatg tatcaccttg atggttgtgg tgttggggtc 2280 ctgatttcag cattcatgag tcaggggaag gtccctgcta aggacagacc ttaggagggc 2340 agttggtcca ggacccacac ttgctttcct cgtgtttcct gatcctgcct tgggtctgta 2400 gtcatacttc tggaaattcc ttttgggtcc aagacgagga ggttcctcta agatctcatg 2460 gccctgcttc ctcccagtcc cctcacagga cattttcttc ccacaggtgg aaaaggaggg 2520 agctactctc aggctgcgtg taagtggtgg gggtgggagt gtggaggagc tcacccaccc 2580 cataattcct cctgtcccac gtctcctgcg ggctctgacc aggtcctgtt tttgttctac 2640 tccagccagc gacagtgccc agggctctga tgtgtctctc acagcttga 2689 //