Dbfetch
ID FN555526; SV 1; linear; genomic DNA; STD; HUM; 1022 BP. XX AC FN555526; XX DT 10-OCT-2009 (Rel. 102, Created) DT 10-OCT-2009 (Rel. 102, Last updated, Version 1) XX DE Homo sapiens partial HLA-B gene for MHC class I antigen, HLA-B*58new DE allele, exons 2-4 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-1022 RA McWhinnie A.J.; RT ; RL Submitted (09-OCT-2009) to the INSDC. RL McWhinnie A.J., Research Institute, Anthony Nolan Trust, Fleet Road, RL Hampstead, London., NW3 2QG, UNITED KINGDOM. XX RN [2] RA McWhinnie A.J., Wallis-Jones S.; RT "Exons 2, 3 and 4 sequence of a new HLA-B*58 allele differing by a single RT nucleotide A355C from B*580101 resulting in a coding change from Isoleucine RT to Leucine at codon 95"; RL Unpublished. XX DR MD5; 44fd45cd1b2b09dd60cd4d8e21a792e5. DR IMGT/HLA; HLA-B*58:26; HLA04397. XX FH Key Location/Qualifiers FH FT source 1..1022 FT /organism="Homo sapiens" FT /chromosome="6" FT /map="6p21.3" FT /mol_type="genomic DNA" FT /clone="LAAL686132AN" FT /tissue_type="peripheral blood" FT /db_xref="taxon:9606" FT exon 1..270 FT /gene="HLA-B" FT /allele="HLA-B*58new" FT /number=2 FT CDS join(<1..270,371..646,747..>1022) FT /codon_start=3 FT /gene="HLA-B" FT /allele="HLA-B*58new" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:D0AB32" FT /protein_id="CBG92011.1" FT /translation="SHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRTE FT PRAPWIEQEGPEYWDGETRNMKASAQTYRENLRIALRYYNQSEAGSHILQRMYGCDLGP FT DGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGLC FT VEWLRRYLENGKETLQRADPPKTHVTHHPVSDHEATLRCWALGFYPAEITLTWQRDGED FT QTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW" FT gap 271..370 FT /estimated_length=unknown FT exon 371..646 FT /gene="HLA-B" FT /allele="HLA-B*58new" FT /number=3 FT gap 647..746 FT /estimated_length=unknown FT exon 747..1022 FT /gene="HLA-B" FT /allele="HLA-B*58new" FT /number=4 XX SQ Sequence 1022 BP; 173 A; 258 C; 276 G; 115 T; 200 other; gctcccactc catgaggtat ttctacaccg ccatgtcccg gcccggccgc ggggagcccc 60 gcttcatcgc agtgggctac gtggacgaca cccagttcgt gaggttcgac agcgacgccg 120 cgagtccgag gacggagccc cgggcgccat ggatagagca ggaggggccg gagtattggg 180 acggggagac acggaacatg aaggcctccg cgcagactta ccgagagaac ctgcggatcg 240 cgctccgcta ctacaaccag agcgaggccg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 300 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360 nnnnnnnnnn ggtctcacat cctccagagg atgtatggct gcgacctggg gcccgacggg 420 cgcctcctcc gcgggcatga ccagtccgcc tacgacggca aggattacat cgccctgaac 480 gaggacctga gctcctggac cgcggcggac accgcggctc agatcaccca gcgcaagtgg 540 gaggcggccc gtgtggcgga gcagctgaga gcctacctgg agggcctgtg cgtggagtgg 600 ctccgcagat acctggagaa cgggaaggag acgctgcagc gcgcggnnnn nnnnnnnnnn 660 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 720 nnnnnnnnnn nnnnnnnnnn nnnnnnaccc cccaaagaca cacgtgaccc accaccccgt 780 ctctgaccat gaggccaccc tgaggtgctg ggccctgggc ttctaccctg cggagatcac 840 actgacctgg cagcgggatg gcgaggacca aactcaggac actgagcttg tggagaccag 900 accagcagga gatagaacct tccagaagtg ggcagctgtg gtggtgcctt ctggagaaga 960 gcagagatac acatgccatg tacagcatga ggggctgccg aagcccctca ccctgagatg 1020 gg 1022 //