ID FN433487; SV 1; linear; genomic DNA; STD; HUM; 1022 BP.
XX
AC FN433487;
XX
DT 03-AUG-2009 (Rel. 101, Created)
DT 03-AUG-2009 (Rel. 101, Last updated, Version 1)
XX
DE Homo sapiens partial HLA-C gene for MHC class I antigen, HLA-Cw*07new
DE allele, exons 2-4
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-1022
RA McWhinnie A.J.;
RT ;
RL Submitted (31-JUL-2009) to the INSDC.
RL McWhinnie A.J., Research Institute, Anthony Nolan Trust, Fleet Road,
RL Hampstead, London., NW3 2QG, UNITED KINGDOM.
XX
RN [2]
RA McWhinnie A.J.M., Wallis-Jones S., Little A.M.;
RT "A new HLA-C allele Cw*07XX which differs from HLA-Cw*0749 with a C to A at
RT position 312 resulting in a coding change from Asparagine to Lysine at
RT codon 80";
RL Unpublished.
XX
DR MD5; 841e8698f712c457e12eb0f1c8afc988.
DR IMGT/HLA; HLA-C*07:76:01; HLA04130.
XX
FH Key Location/Qualifiers
FH
FT source 1..1022
FT /organism="Homo sapiens"
FT /chromosome="6"
FT /map="6p21.3"
FT /mol_type="genomic DNA"
FT /country="United Kingdom"
FT /clone="LISU617232AN"
FT /tissue_type="peripheral blood"
FT /db_xref="taxon:9606"
FT mRNA join(<1..270,371..646,747..>1022)
FT /gene="HLA-C"
FT /allele="HLA-Cw*07new"
FT exon 1..270
FT /gene="HLA-C"
FT /allele="HLA-Cw*07new"
FT /number=2
FT CDS join(<1..270,371..646,747..>1022)
FT /codon_start=3
FT /gene="HLA-C"
FT /allele="HLA-Cw*07new"
FT /product="MHC class I antigen"
FT /function="antigen presenting molecule"
FT /db_xref="InterPro:IPR001039"
FT /db_xref="InterPro:IPR003597"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR011161"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="InterPro:IPR037055"
FT /db_xref="UniProtKB/TrEMBL:C7C619"
FT /protein_id="CBA11956.1"
FT /translation="SHSMRYFDTAVSRPGRGEPRFISVGYVDDTQFVRFDSDAASPRGE
FT PRAPWVEQEGPEYWDRETQKYKRQAQADRVNLRKLRGYYNQSEDGSHTLQRMSGCDLGP
FT DGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTAAQITQRKLEAARAAEQLRAYLEGTC
FT VEWLRRYLENGKETLQRAEPPKTHVTHHPLSDHEATLRCWALGFYPAEITLTWQRDGED
FT QTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYTCHMQHEGLQEPLTLSW"
FT gap 271..370
FT /estimated_length=unknown
FT exon 371..646
FT /gene="HLA-C"
FT /allele="HLA-Cw*07new"
FT /number=3
FT gap 647..746
FT /estimated_length=unknown
FT exon 747..1022
FT /gene="HLA-C"
FT /allele="HLA-Cw*07new"
FT /number=4
XX
SQ Sequence 1022 BP; 170 A; 260 C; 283 G; 109 T; 200 other;
gctcccactc catgaggtat ttcgacaccg ccgtgtcccg gcccggccgc ggagagcccc 60
gcttcatctc agtgggctac gtggacgaca cgcagttcgt gcggttcgac agcgacgccg 120
cgagtccgag aggggagccg cgggcgccgt gggtggagca ggaggggccg gagtattggg 180
accgggagac acagaagtac aagcgccagg cacaggctga ccgagtgaac ctgcggaaac 240
tgcgcggcta ctacaaccag agcgaggacg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 300
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360
nnnnnnnnnn ggtctcacac cctccagagg atgtctggct gcgacctggg gcccgacggg 420
cgcctcctcc gcgggtatga ccagtccgcc tacgacggca aggattacat cgccctgaac 480
gaggacctgc gctcctggac cgccgcggac accgcggctc agatcaccca gcgcaagttg 540
gaggcggccc gtgcggcgga gcagctgaga gcctacctgg agggcacgtg cgtggagtgg 600
ctccgcagat acctggagaa cgggaaggag acgctgcagc gcgcagnnnn nnnnnnnnnn 660
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 720
nnnnnnnnnn nnnnnnnnnn nnnnnnaacc cccaaagaca cacgtgaccc accaccccct 780
ctctgaccat gaggccaccc tgaggtgctg ggccctgggc ttctaccctg cggagatcac 840
actgacctgg cagcgggatg gggaggacca gacccaggac accgagcttg tggagaccag 900
gccagcagga gatggaacct tccagaagtg ggcagctgtg gtggtgcctt ctggacaaga 960
gcagagatac acgtgccata tgcagcacga ggggctgcaa gagcccctca ccctgagctg 1020
gg 1022
//