Dbfetch
ID FM161906; SV 1; linear; genomic DNA; STD; HUM; 1049 BP. XX AC FM161906; XX DT 29-MAY-2008 (Rel. 95, Created) DT 29-MAY-2008 (Rel. 95, Last updated, Version 1) XX DE Homo sapiens partial HLA-B gene for MHC class I antigen, HLA-B*40SH allele, DE exons 2-3 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-1049 RA Rowlands J.; RT ; RL Submitted (20-MAY-2008) to the INSDC. RL Rowlands J., Immunogenetics, Welsh Transplantation and Immunogenetics, RL Welsh Blood Service, Ely Valley Road, Talbot Green, Pontyclun, CF72 9WB, RL UNITED KINGDOM. XX RN [2] RA Hammond L., Rowlands J., Johnson J., Darke C.; RT "A novel HLA-B*40 allele"; RL Unpublished. XX DR MD5; 0816f2993bd1c4d6228d7236b8868324. DR IMGT/HLA; HLA-B*40:92; HLA03392. XX FH Key Location/Qualifiers FH FT source 1..1049 FT /organism="Homo sapiens" FT /chromosome="6" FT /mol_type="genomic DNA" FT /tissue_type="peripheral blood" FT /PCR_primers="fwd_name: BE1c, fwd_seq: cctcctgctgctctcggc, FT rev_name: 3BIn3-108, rev_seq: attctccattcaagggagggcgac" FT /db_xref="taxon:9606" FT CDS join(<159..428,674..>949) FT /codon_start=3 FT /gene="HLA-B" FT /allele="HLA-B*40SH" FT /product="MHC class 1 antigen" FT /function="antigen presenting molecule" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:B3GV27" FT /protein_id="CAQ55956.1" FT /translation="SHSMRYFHTAMSRPGRGEPRFITVGYVDDTLFVRFDSDATSPRKE FT PRAPWIEQEGPEYWDRETQISKTNTQTYRESLRNLRGYYNQSEAGSHTLQRMYGCDVGP FT DGRLLRGHNQYAYDGKDYIALNEDLRSWTAADTAAQISQRKLEAARVAEQLRAYLEGLC FT VEWLRRYLENGKETLQRA" FT exon <159..428 FT /gene="HLA-B" FT /allele="HLA-B*40SH" FT /number=2 FT intron 429..673 FT /gene="HLA-B" FT /allele="HLA-B*40SH" FT /number=2 FT exon 674..949 FT /gene="HLA-B" FT /allele="HLA-B*40SH" FT /number=3 XX SQ Sequence 1049 BP; 185 A; 340 C; 388 G; 136 T; 0 other; cggccctggc cctgaccgag acctgggccg gtgagtgcgg gtcggcaggg aaatggcctc 60 tgtggggagg agcgagggga ccgcaggcgg gggcgcagga cccggggagc cgcgccggga 120 ggagggtcgg gcgggtctca gctcctcctc gcccccaggc tcccactcca tgaggtattt 180 ccacaccgcc atgtcccggc ccggccgcgg ggagccccgc ttcatcaccg tgggctacgt 240 ggacgacacg ctgttcgtga ggttcgacag cgacgccacg agtccgagga aggagccgcg 300 ggcgccatgg atagagcagg aggggccgga gtattgggac cgggagacac agatctccaa 360 gaccaacaca cagacttacc gagagagcct gcggaacctg cgcggctact acaaccagag 420 cgaggccggt gagtgacccc ggcccggggc gcaggtcacg actccccatc ccccacgtac 480 ggcccgggtc gccccgagtc tccgggtccg agatccgacc ccctgaggcc gcgggacccg 540 cccagaccct cgaccggcga gagccccagg cgcgtttacc cggtttcatt ttcagttgag 600 gccaaaatcc ccgcgggttg gtcggggcgg ggcggggctc gggggactgg gctgaccgcg 660 gggccggggc cagggtctca caccctccag aggatgtacg gctgcgacgt ggggccggac 720 gggcgcctcc tccgcgggca taaccagtac gcctacgacg gcaaggatta catcgccctg 780 aacgaggacc tgcgctcctg gaccgccgcg gacacggcgg ctcagatctc ccagcgcaag 840 ttggaggcgg cccgtgtggc ggagcagctg agagcctacc tggagggcct gtgcgtggag 900 tggctccgca gatacctgga gaacgggaag gagacgctgc agcgcgcggg taccaggggc 960 agtggggagc cttccccatc tcctataggt cgccggggat ggcctcccac gagaagagga 1020 ggaaaatggg atcagcgcta gaatgtcgc 1049 //