Dbfetch
ID FJ973625; SV 2; linear; genomic DNA; STD; HUM; 2894 BP.
XX
AC FJ973625;
XX
DT 10-JUN-2009 (Rel. 101, Created)
DT 17-SEP-2009 (Rel. 102, Last updated, Version 2)
XX
DE Homo sapiens MHC class I antigen (HLA-Cw) gene, HLA-Cw-Cw*0340 allele,
DE complete cds.
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-2894
RA Cheng L., Zou H., Zhu W., Du J., Li Z., Jin S., Wang D., Gao S., Cheng X.,
RA Tian Z.;
RT "Homo sapiens major histocompatibility complex class I, Cw, genomic
RT sequence";
RL Unpublished.
XX
RN [2]
RP 1-2894
RA Cheng L., Zou H., Zhu W., Du J., Li Z., Jin S., Wang D., Gao S., Cheng X.,
RA Tian Z.;
RT ;
RL Submitted (28-APR-2009) to the INSDC.
RL Immunogenetics Lab, ShenZhen Blood Center, MeiGang Nan Street, NiGang Xi
RL Road, Futian District, Shenzhen, Guangdong 518035, China
XX
RN [3]
RC Sequence update by submitter
RP 1-2894
RA Cheng L., Zou H., Zhu W., Du J., Li Z., Jin S., Wang D., Gao S., Cheng X.,
RA Tian Z.;
RT ;
RL Submitted (15-SEP-2009) to the INSDC.
RL Immunogenetics Lab, ShenZhen Blood Center, MeiGang Nan Street, NiGang Xi
RL Road, Futian District, Shenzhen, Guangdong 518035, China
XX
DR MD5; e98cb9b8c9e112fc2f5ebb414425e331.
DR IMGT/HLA; HLA-C*03:40:01; HLA02881.
XX
CC On Sep 15, 2009 this sequence version replaced gi:238928489.
XX
FH Key Location/Qualifiers
FH
FT source 1..2894
FT /organism="Homo sapiens"
FT /chromosome="6"
FT /map="p21"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene <1..>2894
FT /gene="HLA-Cw"
FT /allele="Cw*0340"
FT mRNA join(<1..73,204..473,719..994,1582..1857,1979..2098,
FT 2538..2570,2678..2725,2890..>2894)
FT /gene="HLA-Cw"
FT /allele="Cw*0340"
FT /product="MHC class I antigen"
FT CDS join(1..73,204..473,719..994,1582..1857,1979..2098,
FT 2538..2570,2678..2725,2890..2894)
FT /codon_start=1
FT /gene="HLA-Cw"
FT /allele="Cw*0340"
FT /product="MHC class I antigen"
FT /note="major histocompatibility complex class I"
FT /db_xref="GOA:C5IYE2"
FT /db_xref="InterPro:IPR001039"
FT /db_xref="InterPro:IPR003006"
FT /db_xref="InterPro:IPR003597"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR010579"
FT /db_xref="InterPro:IPR011161"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="InterPro:IPR037055"
FT /db_xref="UniProtKB/TrEMBL:C5IYE2"
FT /protein_id="ACR78562.2"
FT /translation="MRVMAPRTLILLLSGALALTETWAGSHSMRYFYTAVSRPGRGEPH
FT FIAVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQTDRVSLRN
FT LRGYYNQSEAGSHIIQRMYGCDVGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTA
FT AQITQRKWEAAREAEQLRAYLEGLCVEWLRRYLKNGKETLQRAEHPKTHVTHHPVSDHE
FT ATLRCWALGFYPAEITLTWQWDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY
FT TCHVQHEGLPEPLTLRWEPSSQPTIPIVGIVAGLAVLAVLAVLGAVVAVVMCRRKSSGG
FT KGGSCSQAASSNSAQGSDESLIACKA"
XX
SQ Sequence 2894 BP; 540 A; 825 C; 934 G; 595 T; 0 other;
atgcgggtca tggcgccccg aaccctcatc ctgctgctct cgggagccct ggccctgacc 60
gagacctggg ccggtgagtg cggggttggg agggaatcgg cctctgcgga gaggagcgag 120
gggcccgccc ggcgagggcg caggacccgg ggagccgcgc agggaggagg gtcgggcggg 180
tctcagcccc tcctcgcccc caggctccca ctccatgagg tatttctaca ccgctgtgtc 240
ccggcccggc cgcggggagc cccacttcat cgcagtgggc tacgtggacg acacgcagtt 300
cgtgcggttc gacagcgacg ccgcgagtcc gagaggggag ccgcgggcgc cgtgggtgga 360
gcaggagggg ccggagtatt gggaccggga gacacagaag tacaagcgcc aggcacagac 420
tgaccgagtg agcctgcgga acctgcgcgg ctactacaac cagagcgagg ccggtgagtg 480
accccggccc ggggcgcagg tcacgacccc tcctcatccc ccacggacgg cccgggtcgc 540
cccaagtctc ccggtctgag atccaccccg aggctgcgga acccgcccag accctcgacc 600
ggagagagcc ccagtcacct ttacccggtt tcattttcag tttaggccaa aatccccgcg 660
ggttggtcgg ggcggggcgg ggctcggggg acggggctga ccgcgggggc ggggccaggg 720
tctcacatca tccagaggat gtatggctgc gacgtggggc ccgacgggcg cctcctccgc 780
gggtatgacc agtccgccta cgacggcaag gattacatcg ccctgaacga ggatctgcgc 840
tcctggaccg ccgcggacac ggcggctcag atcacccagc gcaagtggga ggcggcccgt 900
gaggcggagc agctgagagc ctacctggag ggcctgtgcg tggagtggct ccgcagatac 960
ctgaagaatg ggaaggagac gctgcagcgc gcgggtacca ggggcagtgg ggagccttcc 1020
ccatctcctg tagatctccc gggatggcct cccacgagga ggggaggaaa atgggatcag 1080
cgctagaata tcgccctccc ttgaatggag aatgggatga gttttcctga gtttcctctg 1140
agggccccct ctgctctcta ggacaattaa gggatgaagt ccttgaggaa atggagggga 1200
agacagtccc tagaatactg atcaggggtc ccctttgacc actttgacca ctgcagcagc 1260
tgtggtcagg ctgctgacct ttctctcagg ccttgttctc tgcctcacgc tcaatgtgtt 1320
tgaaggtttg attccagctt ttctgagtcc ttcggcctcc actcaggtca ggaccagaag 1380
tcgctgttcc tccctcagag actagaactt tccaatgaat aggagattat cccaggtgcc 1440
tgtgtccagg ctggcgtctg ggttctgtgc ccccttcccc accccaggtg tcctgtccgt 1500
tctcaggatg gtcacatggg cgctgttgga gtgtcgcaag agagatacaa agtgtctgaa 1560
ttttctgact cttcccgtca gaacacccaa agacacacgt gacccaccat cccgtctctg 1620
accatgaggc caccctgagg tgctgggccc tgggcttcta ccctgcggag atcacactga 1680
cctggcagtg ggatggggag gaccaaactc aggacactga gcttgtggag accaggccag 1740
caggagatgg aaccttccag aagtgggcag ctgtggtggt gccttctgga gaagagcaga 1800
gatacacgtg ccatgtgcag cacgaggggc tgccggagcc cctcaccctg agatggggta 1860
aggaggggga tgaggggtga tgtgtcttct cagggaaagc agaagtcctg gagcccttca 1920
gccaggtcag ggctgaggct tgggggtcag ggcccctcac cttcccctcc tttcccagag 1980
ccgtcttccc agcccaccat ccccatcgtg ggcatcgttg ctggcctggc tgtcctggct 2040
gtcctagctg tcctaggagc tgtggtggct gttgtgatgt gtaggaggaa gagctcaggt 2100
agggaagggg tgaggagtgg ggtctgggtt ttcttgttcc actgggagtt tcaagcccca 2160
ggtagaagtg tgccccacct cgttactgga agcaccatcc acacatgggc catcccagcc 2220
tgggaccctg tgtgccagca cttactctgt tgtgaagcac atgacaatga aggacagatg 2280
tatcaccttg atgattatgg tgttggggtc cttgattcca gcattcatga gtcaggggaa 2340
ggtccctgct aaggacagac cttaggaggg cagttgctcc agaacccaca gctgctttcc 2400
ccgtgtttcc tgatcctgcc ctgggtctgc agtcatagtt ctggaaactt ctcttgggtc 2460
caagactagg aggttcccct aagatcgcat ggccctgact cctccctgtc ccctcacagg 2520
gcattttctt cccacaggtg gaaaaggagg gagctgctct caggctgcgt gtaagtgatg 2580
gcggtgggcg tgtggaggag ctcacccacc ccataattcc tcttgtccca catctcctgc 2640
gggctctgac caggtctttt tttttgttct accccagcca gcaacagtgc ccagggctct 2700
gatgagtctc tcatcgcttg taaaggtgag attctgggga gctgaagtgg tcgggggtgg 2760
ggcagaggga aaaggcctag gtaatgggga tcctttgatt gggacgtttc gaatgtgtgg 2820
tgagctgttc agagtgtgat cacttaccat gactgacctg aatttgttca tgactattgt 2880
gttctgtagc ctga 2894
//