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EBI Dbfetch

ID   FJ428217; SV 1; linear; genomic DNA; STD; HUM; 270 BP.
XX
AC   FJ428217;
XX
DT   29-DEC-2008 (Rel. 98, Created)
DT   27-JUN-2013 (Rel. 117, Last updated, Version 2)
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DE   Homo sapiens MHC class I antigen (HLA-A) gene, HLA-A*03new allele, exon 2
DE   and partial cds.
XX
KW   .
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-270
RX   DOI; 10.1111/tan.12082.
RX   PUBMED; 23646953.
RA   Liu N., Zhixin Z., Shan X., Wang L., Cui S.;
RT   "A novel allele, HLA-A*03:01:09, identified by sequence-based typing in a
RT   Chinese individual";
RL   Tissue Antigens 81(6):452-453(2013).
XX
RN   [2]
RP   1-270
RA   Liu N., Shan X., Li W., He X., Wang L., Wang L., Gong Z., Zhao B., Ni L.,
RA   Cui S., Zhang Z.;
RT   "A novel allele identified by sequence-based strategies";
RL   Unpublished.
XX
RN   [3]
RP   1-270
RA   Liu N., Shan X., Li W., He X., Wang L., Wang L., Gong Z., Zhao B., Ni L.,
RA   Cui S., Zhang Z.;
RT   ;
RL   Submitted (30-OCT-2008) to the INSDC.
RL   HLA lab, Beijing Red Cross Blood Center, No 37 North Third Ring Road,
RL   Beijing 100088, China
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DR   MD5; ecda9607f9ad50162e7c960ae99abf9c.
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FH   Key             Location/Qualifiers
FH
FT   source          1..270
FT                   /organism="Homo sapiens"
FT                   /chromosome="6"
FT                   /map="6q21.3"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT   gene            <1..>270
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*03new"
FT   mRNA            <1..>270
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*03new"
FT                   /product="MHC class I antigen"
FT   CDS             <1..>270
FT                   /codon_start=3
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*03new"
FT                   /product="MHC class I antigen"
FT                   /db_xref="GOA:B8XRE8"
FT                   /db_xref="IMGT/HLA:A*03:01:09"
FT                   /db_xref="InterPro:IPR001039"
FT                   /db_xref="InterPro:IPR011161"
FT                   /db_xref="InterPro:IPR011162"
FT                   /db_xref="UniProtKB/TrEMBL:B8XRE8"
FT                   /protein_id="ACJ31783.1"
FT                   /translation="SHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRME
FT                   PRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEA"
FT   exon            1..270
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*03new"
FT                   /number=2
FT   variation       53
FT                   /gene="HLA-A"
FT                   /replace="g"
FT                   /note="as compared to HLA-A*0301"
XX
SQ   Sequence 270 BP; 53 A; 83 C; 96 G; 38 T; 0 other;
     gctcccactc catgaggtat ttcttcacat ccgtgtcccg gcccggccgc ggagagcccc        60
     gcttcatcgc cgtgggctac gtggacgaca cgcagttcgt gcggttcgac agcgacgccg       120
     cgagccagag gatggagccg cgggcgccgt ggatagagca ggaggggccg gagtattggg       180
     accaggagac acggaatgtg aaggcccagt cacagactga ccgagtggac ctggggaccc       240
     tgcgcggcta ctacaaccag agcgaggccg                                        270
//


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