Dbfetch
ID FJ227108; SV 1; linear; genomic DNA; STD; HUM; 1075 BP. XX AC FJ227108; XX DT 15-OCT-2008 (Rel. 97, Created) DT 12-DEC-2012 (Rel. 115, Last updated, Version 2) XX DE Homo sapiens isolate M138L MHC class I antigen (HLA-A) gene, HLA-A*03new DE allele, exons 2 through 4 and partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-1075 RX DOI; 10.1016/j.humimm.2009.06.011. RX PUBMED; 19539002. RA Cordovado S.K., Hancock L.N., Hendrix M., Greene C.N., Mueller P.W.; RT "Novel human leukocyte antigen class I and class II alleles identified by RT sequence-based typing in the Genetics of Kidneys in Diabetes (GoKinD) study RT population"; RL Hum. Immunol. 70(9):747-749(2009). XX RN [2] RP 1-1075 RA Hancock L.N., Cordovado S.K., Mueller P.W.; RT ; RL Submitted (19-SEP-2008) to the INSDC. RL NCEH/DLS/NSMBB/MRAL, Centers for Disease Control and Prevention, 4770 RL Buford Highway MS F-24, Atlanta, GA 30341, USA XX DR MD5; 75c2ba66cf288c7d178406083a498f38. DR IMGT/HLA; HLA-A*03:44:01; HLA03525. XX FH Key Location/Qualifiers FH FT source 1..1075 FT /organism="Homo sapiens" FT /chromosome="6" FT /map="6p21.3" FT /isolate="M138L" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <1..>1022 FT /gene="HLA-A" FT /allele="HLA-A*03new" FT mRNA join(<1..270,371..646,747..>1022) FT /gene="HLA-A" FT /allele="HLA-A*03new" FT /product="MHC class I antigen" FT CDS join(<1..270,371..646,747..>1022) FT /codon_start=3 FT /gene="HLA-A" FT /allele="HLA-A*03new" FT /product="MHC class I antigen" FT /note="antigen presenting molecule" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:B6ECH6" FT /protein_id="ACI43212.1" FT /translation="SHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRME FT PRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYGCDVGS FT DGRFLRGYRQDAYDGKDYIALNEDLRSWTAADLAAQITKRKWEAAHEAEQLRAYLDGTC FT VEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEATLRCWALGFYPAEITLTWQRDGED FT QTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW" FT exon 1..270 FT /gene="HLA-A" FT /allele="HLA-A*03new" FT /number=2 FT gap 271..370 FT /estimated_length=unknown FT exon 371..646 FT /gene="HLA-A" FT /allele="HLA-A*03new" FT /number=3 FT gap 647..746 FT /estimated_length=unknown FT exon 747..1022 FT /gene="HLA-A" FT /allele="HLA-A*03new" FT /number=4 XX SQ Sequence 1075 BP; 179 A; 256 C; 306 G; 134 T; 200 other; gctcccactc catgaggtat ttcttcacat ccgtgtcccg gcccggccgc ggggagcccc 60 gcttcatcgc cgtgggctac gtggacgaca cgcagttcgt gcggttcgac agcgacgccg 120 cgagccagag gatggagccg cgggcgccgt ggatagagca ggaggggccg gagtattggg 180 accaggagac acggaatgtg aaggcccagt cacagactga ccgagtggac ctggggaccc 240 tgcgcggcta ctacaaccag agcgaggccg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 300 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360 nnnnnnnnnn gttctcacac catccagata atgtatggct gcgacgtggg gtcggacggg 420 cgcttcctcc gcgggtaccg gcaggacgcc tacgacggca aggattacat cgccctgaac 480 gaggacctgc gctcttggac cgcggcggac ttggcggctc agatcaccaa gcgcaagtgg 540 gaggcggccc atgaggcgga gcagttgaga gcctacctgg atggcacgtg cgtggagtgg 600 ctccgcagat acctggagaa cgggaaggag acgctgcagc gcacggnnnn nnnnnnnnnn 660 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 720 nnnnnnnnnn nnnnnnnnnn nnnnnnaccc ccccaagaca catatgaccc accaccccat 780 ctctgaccat gaggccaccc tgaggtgctg ggccctgggc ttctaccctg cggagatcac 840 actgacctgg cagcgggatg gggaggacca gacccaggac acggagctcg tggagaccag 900 gcctgcaggg gatggaacct tccagaagtg ggcggctgtg gtggtgcctt ctggagagga 960 gcagagatac acctgccatg tgcagcatga gggtctgccc aagcccctca ccctgagatg 1020 gggtaaggag ggagatgggg gtgtcatgtc tcttagggaa agcaggagcc tctct 1075 //