Dbfetch

ID   FJ200655; SV 1; linear; genomic DNA; STD; HUM; 786 BP.
XX
AC   FJ200655;
XX
DT   14-OCT-2008 (Rel. 97, Created)
DT   17-JUL-2010 (Rel. 105, Last updated, Version 2)
XX
DE   Homo sapiens nonfunctional MHC class I antigen (HLA-A) gene, HLA-A*01 new
DE   allele, partial sequence.
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-786
RX   PUBMED; 20403142.
RA   Liu N., An S.-P., Li S.-Y., Yan L.-N., Yuan Y.-H.;
RT   "Identification of the novel allele HLA-A*0131N by sequence-based typing in
RT   a Chinese individual";
RL   Tissue Antigens 76(2):149-150(2010).
XX
RN   [2]
RP   1-786
RA   Yan L.N., An S.P., Li S.Y., Xie J.H., Dong L., Dong Z., Yuan Y.H.;
RT   "A new HLA-A*01 allele detected with SBT";
RL   Unpublished.
XX
RN   [3]
RP   1-786
RA   Yan L.N., An S.P., Li S.Y., Xie J.H., Dong L., Dong Z., Yuan Y.H.;
RT   ;
RL   Submitted (12-SEP-2008) to the INSDC.
RL   Tissue Typing Lab, Tianjin Blood Center, No. 424, Huanghe Road, Tianjin
RL   300110, China
XX
DR   MD5; ee7242b55deb9ee816e34f920e3c1070.
DR   IMGT/HLA; A*01:31N; HLA03501.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..786
FT                   /organism="Homo sapiens"
FT                   /chromosome="6"
FT                   /map="6p21.3"
FT                   /mol_type="genomic DNA"
FT                   /note="PCR_primers=fwd_name: HLA-A-E2F;
FT                   PCR_primers=fwd_name: HLA-A-E3F"
FT                   /db_xref="taxon:9606"
FT   gene            <1..>786
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*01 new"
FT   misc_feature    join(<1..270,511..>786)
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*01 new"
FT                   /note="nonfunctional MHC class I antigen due to mutation"
FT   variation       178
FT                   /gene="HLA-A"
FT                   /replace="g"
FT                   /note="compared with HLA-A*01010101"
FT   gap             271..510
FT                   /estimated_length=240
XX
SQ   Sequence 786 BP; 113 A; 164 C; 194 G; 75 T; 240 other;
     gctcccactc catgaggtat ttcttcacat ccgtgtcccg gcccggccgc ggggagcccc        60
     gcttcatcgc cgtgggctac gtggacgaca cgcagttcgt gcggttcgac agcgacgccg       120
     cgagccagaa gatggagccg cgggcgccgt ggatagagca ggaggggccg gagtattagg       180
     accaggagac acggaatatg aaggcccact cacagactga ccgagcgaac ctggggaccc       240
     tgcgcggcta ctacaaccag agcgaggacg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       300
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       360
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       420
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       480
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn gttctcacac catccagata atgtatggct       540
     gcgacgtggg gccggacggg cgcttcctcc gcgggtaccg gcaggacgcc tacgacggca       600
     aggattacat cgccctgaac gaggacctgc gctcttggac cgcggcggac atggcagctc       660
     agatcaccaa gcgcaagtgg gaggcggtcc atgcggcgga gcagcggaga gtctacctgg       720
     agggccggtg cgtggacggg ctccgcagat acctggagaa cgggaaggag acgctgcagc       780
     gcacgg                                                                  786
//