Dbfetch

Dbfetch

ID   EU933935; SV 1; linear; genomic DNA; STD; HUM; 1745 BP.
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AC   EU933935;
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DT   31-JUL-2009 (Rel. 101, Created)
DT   02-AUG-2010 (Rel. 105, Last updated, Version 2)
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DE   Homo sapiens clone GM17134 natural killer immunoglobulin-like receptor
DE   (KIR2DL2) gene, KIR2DL2*001 variant allele, complete cds.
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KW   .
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RP   1-1745
RX   DOI; 10.1007/s00251-010-0458-8.
RX   PUBMED; 20585770.
RA   Hou L., Chen M., Jiang B., Wu D., Ng J., Hurley C.K.;
RT   "Thirty allele-level haplotypes centered around KIR2DL5 define the
RT   diversity in an African American population";
RL   Immunogenetics 62(8):491-498(2010).
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RN   [2]
RP   1-1745
RA   Hou L., Hurley C.K., Steiner N.K., Belle I.;
RT   "Investigation of killer cell immunoglobulin-like receptor gene diversity
RT   in an African American population";
RL   Unpublished.
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RN   [3]
RP   1-1745
RA   Hou L., Hurley C.K., Steiner N.K., Belle I.;
RT   ;
RL   Submitted (30-JUL-2008) to the INSDC.
RL   Oncology/C.W. Bill Young Department of Defense Marrow Donor Program,
RL   Georgetown University Medical Center, 11333 Woodglen Drive, Rockville, MD
RL   20852, USA
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DR   MD5; c23e938d7147a4773eff80e652872e3d.
DR   IPD-KIR; KIR2DL2*007; KIR00328.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1745
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /clone="GM17134"
FT                   /cell_type="B-lymphcoyte"
FT                   /db_xref="taxon:9606"
FT   gene            <1..>1745
FT                   /gene="KIR2DL2"
FT                   /allele="KIR2DL2*001 variant"
FT   mRNA            join(<1..34,135..170,271..570,671..964,1065..1115,
FT                   1216..1317,1418..1470,1569..>1745)
FT                   /gene="KIR2DL2"
FT                   /allele="KIR2DL2*001 variant"
FT                   /product="natural killer immunoglobulin-like receptor"
FT   CDS             join(1..34,135..170,271..570,671..964,1065..1115,
FT                   1216..1317,1418..1470,1569..1745)
FT                   /codon_start=1
FT                   /gene="KIR2DL2"
FT                   /allele="KIR2DL2*001 variant"
FT                   /product="natural killer immunoglobulin-like receptor"
FT                   /protein_id="ACL12514.1"
FT                   /translation="MSLMVVSMACVGFFLLQGAWPHEGVHRKPSLLAHPGRLVKSEETV
FT                   ILQCWSDVRFEHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGSV
FT                   THSPYQLSAPSDPLDIVITGLYEKPSLSAQPGPTVLAGESVTLSCSSRSSYDMYHLSRE
FT                   GEAHECRFSAGPKVNGTFQADFPLGPATHGGTYRCFGSFRDSPYEWSNSSDPLLVSVIG
FT                   NPSNSWPSPTEPSSKTGNPRHLHILIGTSVAIILFILLFFLLHRWCSNKKNAAVMDQES
FT                   AGNRTANSEDSDEQDPQEVTYTQLNHCVFTQRKITRPSQRPKTPPTDIIVYAELPNAES
FT                   RSKVVSCP"
FT   gap             35..134
FT                   /estimated_length=unknown
FT   gap             171..270
FT                   /estimated_length=unknown
FT   gap             571..670
FT                   /estimated_length=unknown
FT   gap             965..1064
FT                   /estimated_length=unknown
FT   gap             1116..1215
FT                   /estimated_length=unknown
FT   gap             1318..1417
FT                   /estimated_length=unknown
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SQ   Sequence 1745 BP; 269 A; 347 C; 265 G; 264 T; 600 other;
     atgtcgctca tggtcgtcag catggcgtgt gttgnnnnnn nnnnnnnnnn nnnnnnnnnn        60
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       120
     nnnnnnnnnn nnnnggttct tcttgctgca gggggcctgg ccacatgagg nnnnnnnnnn       180
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       240
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn gagtccacag aaaaccttcc ctcctggccc       300
     acccaggtcg cctggtgaaa tcagaagaga cagtcatcct gcaatgttgg tcagatgtca       360
     ggtttgagca cttccttctg cacagagaag ggaagtttaa ggacactttg cacctcattg       420
     gagagcacca tgatggggtc tccaaagcca acttctccat cggtcccatg atgcaagacc       480
     ttgcagggac ctacagatgc tacggttctg ttactcactc cccctatcag ttgtcagctc       540
     ccagtgaccc tctggacatc gtcatcacag nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       600
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       660
     nnnnnnnnnn gtctatatga gaaaccttct ctctcagccc agccgggccc cacggttctg       720
     gcaggagaga gcgtgacctt gtcctgcagc tcccggagct cctatgacat gtaccatcta       780
     tccagggagg gggaggccca tgaatgtagg ttctctgcag ggcccaaggt caacggaaca       840
     ttccaggccg actttcctct gggccctgcc acccacggag gaacctacag atgcttcggc       900
     tctttccgtg actctccata cgagtggtca aactcgagtg acccactgct tgtttctgtc       960
     atagnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1020
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnngaaacc cttcaaatag      1080
     ttggccttca cccactgaac caagctctaa aaccgnnnnn nnnnnnnnnn nnnnnnnnnn      1140
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1200
     nnnnnnnnnn nnnnngtaac ccccgacacc tgcacattct gattgggacc tcagtggcca      1260
     tcatcctctt catcctcctc ttctttctcc ttcatcgctg gtgctccaac aaaaaaannn      1320
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1380
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnatg ctgcggtaat ggaccaagag      1440
     tctgcaggga acagaacagc gaatagcgag gtaggtactc ctcggcccgg gctcgtggct      1500
     actgttattc ccaaagagtc ctggaaaatg tgagcaccct ccctcactca gcatttccct      1560
     ctctccagga ctctgatgaa caagaccctc aggaggtgac atacacacag ttgaatcact      1620
     gcgttttcac acagagaaaa atcactcgcc cttctcagag gcccaagaca cccccaacag      1680
     atatcatcgt gtacgcggaa cttccaaatg ctgagtccag atccaaagtt gtctcctgcc      1740
     catga                                                                  1745
//