Dbfetch
ID EU517717; SV 1; linear; genomic DNA; STD; HUM; 884 BP. XX AC EU517717; XX DT 26-MAR-2008 (Rel. 95, Created) DT 17-JUL-2010 (Rel. 105, Last updated, Version 2) XX DE Homo sapiens MHC class I antigen (HLA-B) gene, HLA-B*45 variant allele, DE exons 2, 3 and partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-884 RX PUBMED; 20403139. RA Veiga T.R., Rampim G.F., Gerbase De Lima M.; RT "Identification of two novel HLA-B alleles in the Brazilian population: RT B*4509 and B*5212"; RL Tissue Antigens 76(2):153-154(2010). XX RN [2] RP 1-884 RA Veiga T.R., Rampim G.F., Gerbase-DeLima M.; RT ; RL Submitted (23-FEB-2008) to the INSDC. RL Pediatrics - Immunogenetics Division, Federal University of Sao Paulo, RL Loefgreen 1235, Sao Paulo, SP 04040031, Brazil XX DR MD5; bfd83fdf7f24d432dac66b194faf9ea8. DR IMGT/HLA; HLA-B*45:09; HLA03299. XX FH Key Location/Qualifiers FH FT source 1..884 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <1..>884 FT /gene="HLA-B" FT /allele="HLA-B*45 variant" FT mRNA join(<72..341,592..>867) FT /gene="HLA-B" FT /allele="HLA-B*45 variant" FT /product="MHC class I antigen" FT CDS join(<72..341,592..>867) FT /codon_start=3 FT /gene="HLA-B" FT /allele="HLA-B*45 variant" FT /product="MHC class I antigen" FT /note="antigen presenting molecule" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:B2CJ99" FT /protein_id="ACB20808.1" FT /translation="SHSMRYFHTAMSRPGRGEPRFITVGYVDDTLFVRFDSDATSPRKE FT PRAPWIEQEGPEYWDRETQISKTNTQTYRESLRNLRGYYNQSEAGSHTWQRMYGCDLGP FT DGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQDRAYLEGLC FT VESLRRYLENGKETLQRA" FT exon 72..341 FT /gene="HLA-B" FT /allele="HLA-B*45 variant" FT /number=2 FT exon 592..867 FT /gene="HLA-B" FT /allele="HLA-B*45 variant" FT /number=3 FT variation 657 FT /gene="HLA-B" FT /replace="t" FT /note="compared to HLA-B*4502" FT variation 660 FT /gene="HLA-B" FT /replace="a" FT /note="compared to HLA-B*4502" FT variation 667 FT /gene="HLA-B" FT /replace="t" FT /note="compared to HLA-B*4502" XX SQ Sequence 884 BP; 152 A; 296 C; 326 G; 110 T; 0 other; cgggggcgca ggacccgggg agccgcgccg ggaggagggt cgggcgggtc tcagcccctc 60 ctcgccccca ggctcccact ccatgaggta tttccacacc gccatgtccc ggcccggccg 120 cggggagccc cgcttcatca ccgtgggcta cgtggacgac acgctgttcg tgaggttcga 180 cagcgacgcc acgagtccga ggaaggagcc gcgggcgcca tggatagagc aggaggggcc 240 ggagtattgg gaccgggaga cacagatctc caagaccaac acacagactt accgagagag 300 cctgcggaac ctgcgcggct actacaacca gagcgaggcc ggtgagtgac cccggcccgg 360 ggcgcaggtc acgactcccc atcccccacg tacggcccgg gtcgccccga gtctccgggt 420 ccgagatccg cccccctgag gccgcgggac ccgcccagac cctcgaccgg cgagagcccc 480 aggcgcgttt acccggtttc attttcagtt gaggccaaaa tccccgcggg ttggtcgggg 540 cggggcgggg cggggctcgg gggacggggc tgaccgcggg gcctgggcca gggtctcaca 600 cttggcagag gatgtatggc tgcgacctgg ggcccgacgg gcgcctcctc cgcgggcatg 660 accagtccgc ctacgacggc aaggattaca tcgccctgaa cgaggacctg agctcctgga 720 ccgcggcgga caccgcggct cagatcaccc agcgcaagtg ggaggcggcc cgtgtggcgg 780 agcaggacag agcctacctg gagggcctgt gcgtggagtc gctccgcaga tacctggaga 840 acgggaagga gacgctgcag cgcgcgggta ccaggggcag tggg 884 //