Dbfetch
ID EU517716; SV 1; linear; genomic DNA; STD; HUM; 881 BP. XX AC EU517716; XX DT 26-MAR-2008 (Rel. 95, Created) DT 17-JUL-2010 (Rel. 105, Last updated, Version 3) XX DE Homo sapiens MHC class I antigen (HLA-B) gene, HLA-B*52 variant allele, DE exons 2, 3 and partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-881 RX PUBMED; 20403139. RA Veiga T.R., Rampim G.F., Gerbase De Lima M.; RT "Identification of two novel HLA-B alleles in the Brazilian population: RT B*4509 and B*5212"; RL Tissue Antigens 76(2):153-154(2010). XX RN [2] RP 1-881 RA Veiga T.R., Rampim G.F., Gerbase-DeLima M.; RT ; RL Submitted (22-FEB-2008) to the INSDC. RL Pediatrics - Immunogenetics Division, Federal University of Sao Paulo, RL Loefgreen 1235, Sao Paulo, SP 04040031, Brazil XX DR MD5; 6d15ac3ba697ca5002eed6b95b63633f. DR IMGT/HLA; HLA-B*52:12; HLA03293. XX FH Key Location/Qualifiers FH FT source 1..881 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <1..>881 FT /gene="HLA-B" FT /allele="HLA-B*52 variant" FT mRNA join(<72..341,587..>862) FT /gene="HLA-B" FT /allele="HLA-B*52 variant" FT /product="MHC class I antigen" FT CDS join(<72..341,587..>862) FT /codon_start=3 FT /gene="HLA-B" FT /allele="HLA-B*52 variant" FT /product="MHC class I antigen" FT /note="antigen presenting molecule" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:B2CJ98" FT /protein_id="ACB20807.1" FT /translation="SHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRTE FT PRAPWIEQEGPEYWDRETQISKTNTQTYRENLRIALRYYNQSEAGSHTWQTMYGCDVGP FT DGRLLRGHDQYAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAAREAEQLRAYLEGLC FT VEWLRRHLENGKETLQRA" FT exon 72..341 FT /gene="HLA-B" FT /allele="HLA-B*52 variant" FT /number=2 FT exon 587..862 FT /gene="HLA-B" FT /allele="HLA-B*52 variant" FT /number=3 FT variation 655 FT /gene="HLA-B" FT /replace="a" FT /note="compared to HLA-B*520101" XX SQ Sequence 881 BP; 155 A; 293 C; 321 G; 112 T; 0 other; cgggggcgca ggacctgagg agccgcgccg ggaggagggt cgggcgggtc tcagcccctc 60 ctcgccccca ggctcccact ccatgaggta tttctacacc gccatgtccc ggcccggccg 120 cggggagccc cgcttcatcg cagtgggcta cgtggacgac acccagttcg tgaggttcga 180 cagcgacgcc gcgagtccga ggacggagcc ccgggcgcca tggatagagc aggaggggcc 240 ggagtattgg gaccgggaga cacagatctc caagaccaac acacagactt accgagagaa 300 cctgcggatc gcgctccgct actacaacca gagcgaggcc ggtgagtgac cccggcccgg 360 ggcgcaggtc acgactcccc atcccccacg tacggcccgg gtcgccccga gtctccgggt 420 ccgagatccg cctccctgag gccgcgggac ccgcccagac cctcgaccgg cgagagcccc 480 aggcgcgttt acccggtttc attttcagtt gaggccaaaa tccccgcggg ttggtcgggg 540 cggggcgggg ctcgggggac ggtgctgacc gcggggccgg ggccagggtc tcacacttgg 600 cagacgatgt atggctgcga cgtggggccg gacgggcgcc tcctccgcgg gcatgaccag 660 tacgcctacg acggcaaaga ttacatcgcc ctgaacgagg acctgagctc ctggaccgcg 720 gcggacaccg cggctcagat cacccagcgc aagtgggagg cggcccgtga ggcggagcag 780 ctgagagcct acctggaggg cctgtgcgtg gagtggctcc gcagacacct ggagaacggg 840 aaggagacgc tgcagcgcgc gggtaccagg ggcagtgggg a 881 //