Dbfetch

ID   EU432091; SV 1; linear; mRNA; STD; MAM; 1450 BP.
XX
AC   EU432091;
XX
DT   26-FEB-2008 (Rel. 94, Created)
DT   17-APR-2011 (Rel. 108, Last updated, Version 2)
XX
DE   Sus scrofa MHC class I antigen (SLA-3) mRNA, SLA-3*0601 allele, complete
DE   cds.
XX
KW   .
XX
OS   Sus scrofa (pig)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus.
XX
RN   [1]
RP   1-1450
RX   DOI; 10.1111/j.1744-313X.2009.00853.x.
RX   PUBMED; 19508353.
RA   Ho C.S., Franzo-Romain M.H., Lee Y.J., Lee J.H., Smith D.M.;
RT   "Sequence-based characterization of swine leucocyte antigen alleles in
RT   commercially available porcine cell lines";
RL   Int. J. Immunogenet. 36(4):231-234(2009).
XX
RN   [2]
RP   1-1450
RA   Ho C.-S., Lee Y.-J., Franzo-Romain M.H., Smith D.M.;
RT   ;
RL   Submitted (28-JAN-2008) to the INSDC.
RL   Department of Pathology, University of Michigan Medical School, Ann Arbor,
RL   MI 48109-0669, USA
XX
DR   MD5; 35ff3d148556fb00e6045e6fcaf852a8.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1450
FT                   /organism="Sus scrofa"
FT                   /chromosome="7"
FT                   /mol_type="mRNA"
FT                   /cell_line="ST"
FT                   /db_xref="taxon:9823"
FT   gene            1..1450
FT                   /gene="SLA-3"
FT                   /allele="SLA-3*0601"
FT   CDS             2..1087
FT                   /codon_start=1
FT                   /gene="SLA-3"
FT                   /allele="SLA-3*0601"
FT                   /product="MHC class I antigen"
FT                   /db_xref="GOA:Q8MHT9"
FT                   /db_xref="InterPro:IPR001039"
FT                   /db_xref="InterPro:IPR003006"
FT                   /db_xref="InterPro:IPR003597"
FT                   /db_xref="InterPro:IPR007110"
FT                   /db_xref="InterPro:IPR010579"
FT                   /db_xref="InterPro:IPR011161"
FT                   /db_xref="InterPro:IPR011162"
FT                   /db_xref="InterPro:IPR013783"
FT                   /db_xref="InterPro:IPR036179"
FT                   /db_xref="InterPro:IPR037055"
FT                   /db_xref="UniProtKB/TrEMBL:Q8MHT9"
FT                   /protein_id="ACA21804.1"
FT                   /translation="MGPRALFLLLSGTLALTGTREGPHSLRYFDTAVSRPDRGKPRFIS
FT                   VGYVDDTQFVRFDSDAPNPRMEPRAPWIEQEGQEYWDEETRNAMGSAQTFRVNLNNLRG
FT                   YYNQSEAGSHTLQSMYGCDVGPDWLFLRGYSQDAYDGADYIALNEDLRSWTAADTAAQI
FT                   TKRKWEAADEAEQMRSYLEGACVEWLQKYLQMGNNTLQRAEPPKTHVTRHPSSDLGVTL
FT                   RCWALGFYPKEISLTWQREGQDQSQDMELVETRPSGDGTFQKWAALVVPPGEEQSYTCH
FT                   VQHEGLQEPLTLRWDPPQPPVPIVGIIVGLVLVLVAGAVVAGVVIWRKKRPGEKGGSYT
FT                   QAAGSDSAQGSDVSLTKDPRV"
XX
SQ   Sequence 1450 BP; 284 A; 440 C; 468 G; 258 T; 0 other;
     catggggccc cgagccctct tcttgctgct gtcggggacc ctggccctga ctggtacccg        60
     ggagggtccc cactccctga ggtatttcga caccgccgtg tcccggcccg accgcgggaa       120
     gccccgtttc atctccgtcg gctacgtgga cgacacgcag ttcgtgcggt tcgacagcga       180
     cgccccgaat ccgcggatgg agccgcgggc gccgtggata gagcaggagg ggcaggagta       240
     ttgggatgag gagacgcgga acgccatggg cagcgcacag actttccgag tgaacctgaa       300
     caacctgcgc ggctactaca accagagcga ggccgggtct cacaccctcc agagcatgta       360
     cggctgcgac gtggggccag actggctctt cctccgcggg tacagtcagg acgcctacga       420
     cggcgccgat tacatcgccc tgaacgagga cctgcgctcc tggaccgcgg cggacacggc       480
     ggctcagatc accaagcgca agtgggaggc ggccgatgag gcggagcaaa tgagaagcta       540
     cctggagggc gcgtgtgtgg agtggctcca gaaatacctg cagatgggga ataacacgct       600
     gcagcgcgca gagcctccaa agacacatgt gacccgccac cccagctctg acctgggggt       660
     caccctgagg tgctgggccc tgggcttcta ccctaaggag atctccctga cctggcagcg       720
     cgagggccag gaccagagcc aagacatgga gctggtggag accaggccct caggggatgg       780
     gaccttccag aagtgggcgg ccctggtggt gcctcctgga gaggagcaga gctacacctg       840
     ccatgtgcag catgagggcc tgcaggagcc cctcaccctg agatgggacc ctcctcagcc       900
     ccccgtcccc atcgtgggca tcattgttgg cctggttctc gtcctggttg ctggagccgt       960
     ggtggctgga gttgtgatct ggaggaagaa gcgcccaggt gaaaaaggag ggagctacac      1020
     tcaggctgca ggcagtgaca gtgcccaggg ctctgatgtg tccctcacca aggatcctag      1080
     agtgtgagac agctgccttg tggggactaa gggacacaag atttgttcac gtcccacttt      1140
     gtgacttcag accccctgac tcctatttct gcagctgcct ctgaaagggt ctgtgttcct      1200
     atgagcatcc tgagaggagg tggggaccct ggcccagccc tgccccccat gtcccctctt      1260
     caccctgacc tgtgttctct ttcctgatcc actttccagc tccaacaggt tggggggagg      1320
     caggcggcaa tggaccatct ccatccttat gctaagttca ttgccctgac tggtgactgc      1380
     ggggagccga ggaaacacag gaggccaagg aagggaacta gcctgacggc acagttccaa      1440
     aggcagggtt                                                             1450
//