Dbfetch

Dbfetch

ID   EU432074; SV 1; linear; mRNA; STD; MAM; 869 BP.
XX
AC   EU432074;
XX
DT   26-FEB-2008 (Rel. 94, Created)
DT   17-APR-2011 (Rel. 108, Last updated, Version 2)
XX
DE   Sus scrofa MHC class II antigen (SLA-DRB1) mRNA, SLA-DRB1*0501 allele,
DE   complete cds.
XX
KW   .
XX
OS   Sus scrofa (pig)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus.
XX
RN   [1]
RP   1-869
RX   DOI; 10.1111/j.1744-313X.2009.00853.x.
RX   PUBMED; 19508353.
RA   Ho C.S., Franzo-Romain M.H., Lee Y.J., Lee J.H., Smith D.M.;
RT   "Sequence-based characterization of swine leucocyte antigen alleles in
RT   commercially available porcine cell lines";
RL   Int. J. Immunogenet. 36(4):231-234(2009).
XX
RN   [2]
RP   1-869
RA   Ho C.-S., Lee Y.-J., Franzo-Romain M.H., Smith D.M.;
RT   ;
RL   Submitted (28-JAN-2008) to the INSDC.
RL   Department of Pathology, University of Michigan Medical School, Ann Arbor,
RL   MI 48109-0669, USA
XX
DR   MD5; 7bc507cc069f96881c968e1802442447.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..869
FT                   /organism="Sus scrofa"
FT                   /chromosome="7"
FT                   /mol_type="mRNA"
FT                   /cell_line="SK-RST"
FT                   /db_xref="taxon:9823"
FT   gene            1..869
FT                   /gene="SLA-DRB1"
FT                   /allele="SLA-DRB1*0501"
FT   CDS             3..803
FT                   /codon_start=1
FT                   /gene="SLA-DRB1"
FT                   /allele="SLA-DRB1*0501"
FT                   /product="MHC class II antigen"
FT                   /note="MHC class II antigen beta chain"
FT                   /db_xref="GOA:Q8MGQ2"
FT                   /db_xref="InterPro:IPR000353"
FT                   /db_xref="InterPro:IPR003006"
FT                   /db_xref="InterPro:IPR003597"
FT                   /db_xref="InterPro:IPR007110"
FT                   /db_xref="InterPro:IPR011162"
FT                   /db_xref="InterPro:IPR013783"
FT                   /db_xref="InterPro:IPR014745"
FT                   /db_xref="InterPro:IPR036179"
FT                   /db_xref="UniProtKB/TrEMBL:Q8MGQ2"
FT                   /protein_id="ACA21787.1"
FT                   /translation="MLHLCFSRGFWMVALTVMLVVLSPPLALARDTPPHFLHLVKHECR
FT                   FFNGTERVLLLDRYFYNGEEFVRFDSDVGEFRAVTELGRPDAKYWNSQKDILEDSRASV
FT                   DTYCIHNYRILDTFLVPRRAEPTVTVYPAKTQPLQHHNLLVCSVTGFYPGHVEVRWFRN
FT                   GQEEAAGVVSTGLIPNGDWTFQTMVMLETVPQSGEVYSCRVEHPSLTSPVTVEWRARSE
FT                   SAQGKMMSGIGGFVLGLLFVAVGLFIYFKNQKGRPALQPTGLLS"
XX
SQ   Sequence 869 BP; 174 A; 238 C; 273 G; 184 T; 0 other;
     gcatgttgca tctgtgtttc tccagaggct tttggatggt ggctctgacc gtgatgctgg        60
     tggtgctgag ccctcccttg gctttggcca gggacacccc accgcatttc ttgcacctgg       120
     tgaaacacga gtgtcgtttc ttcaacggga cggagcgggt gctgttgctg gacagatact       180
     tctataacgg agaggagttc gtgcgcttcg acagcgacgt gggcgagttc cgggcggtga       240
     ccgagctggg gcggccagac gccaagtact ggaacagcca gaaggacatc ctggaggact       300
     cacgggcctc agtggacacg tactgcatac acaactacag gattttggat acattcctcg       360
     tgccgcggcg agctgagccc acggtgacgg tgtaccctgc aaagacccag cccctgcagc       420
     accacaacct cctggtctgc tctgtgaccg ggttctaccc aggccacgtg gaggtcaggt       480
     ggttccggaa tggccaggaa gaggcagcgg gggtggtctc cacaggcctg atccctaatg       540
     gagactggac cttccagacc atggtgatgc ttgaaacggt tcctcagagt ggagaggtct       600
     acagctgccg agtggagcac cccagcctga cgagccccgt cacagtggaa tggagggcac       660
     ggtctgaatc tgctcagggc aagatgatga gtgggatcgg gggcttcgtc ctgggtctgc       720
     tctttgttgc tgtggggctg ttcatctact tcaagaatca gaaaggacgc cctgcccttc       780
     agccaacagg cctcctgagc tgaagtgcag atggtgacac tccaagcaag catcctctgt       840
     gccagtgtct tcacagcatg agaaggctc                                         869
//