Dbfetch
ID EU432069; SV 1; linear; mRNA; STD; MAM; 1062 BP. XX AC EU432069; XX DT 26-FEB-2008 (Rel. 94, Created) DT 17-APR-2011 (Rel. 108, Last updated, Version 2) XX DE Sus scrofa MHC class II antigen (SLA-DQB1) mRNA, SLA-DQB1*0101 allele, DE complete cds. XX KW . XX OS Sus scrofa (pig) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus. XX RN [1] RP 1-1062 RX DOI; 10.1111/j.1744-313X.2009.00853.x. RX PUBMED; 19508353. RA Ho C.S., Franzo-Romain M.H., Lee Y.J., Lee J.H., Smith D.M.; RT "Sequence-based characterization of swine leucocyte antigen alleles in RT commercially available porcine cell lines"; RL Int. J. Immunogenet. 36(4):231-234(2009). XX RN [2] RP 1-1062 RA Ho C.-S., Lee Y.-J., Franzo-Romain M.H., Smith D.M.; RT ; RL Submitted (28-JAN-2008) to the INSDC. RL Department of Pathology, University of Michigan Medical School, Ann Arbor, RL MI 48109-0669, USA XX DR MD5; b740097c40c854abb6e78c35864cea4d. XX FH Key Location/Qualifiers FH FT source 1..1062 FT /organism="Sus scrofa" FT /chromosome="7" FT /mol_type="mRNA" FT /cell_line="ST" FT /db_xref="taxon:9823" FT gene 1..1062 FT /gene="SLA-DQB1" FT /allele="SLA-DQB1*0101" FT CDS 13..798 FT /codon_start=1 FT /gene="SLA-DQB1" FT /allele="SLA-DQB1*0101" FT /product="MHC class II antigen" FT /note="MHC class II antigen beta chain" FT /db_xref="GOA:Q4W5W4" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR014745" FT /db_xref="InterPro:IPR036179" FT /db_xref="UniProtKB/TrEMBL:Q4W5W4" FT /protein_id="ACA21782.1" FT /translation="MSGMVALRLPRGLWTAAVTMMLVVLGAPVAEGRDSPQDFVFQFKF FT ECYFFNGTQRVRLVARYIYNQEELLRFDSDVGEYRAVTPLGRPEADSWNGQKDVLEQTR FT AELDTVCKHNYQIEEGTTLQRRVQPTVTISPSKAEALNHHNLLVCAVTDFYPSQVKVQW FT FRNGQEETAGVVSTPLIRNGDWTYQVLVMLEMNLQRGDVYTCRVEHSSLQSPILVEWRA FT QSESAQSKMLSGVGGFVLGLIFLGLGLFIRHRSQKGLVR" XX SQ Sequence 1062 BP; 204 A; 294 C; 320 G; 244 T; 0 other; ttgtcctcaa ttatgtctgg gatggtggct ctgcggctcc ccagaggcct ttggacagcg 60 gccgtgacga tgatgctggt ggtgctgggt gctccggtgg ctgagggcag agactctcca 120 caggatttcg tgttccagtt taagttcgag tgctacttct tcaacggaac gcagcgggtg 180 cggctcgtgg ccagatacat ctacaaccag gaggagcttt tgcgcttcga cagcgacgtg 240 ggggaatacc gggcggtgac cccgctgggg cggccggagg ccgactcctg gaacggccag 300 aaggacgtcc tggagcagac gcgggccgag ctggacacgg tgtgcaaaca caactaccag 360 atagaggaag gcacgactct gcagcggcga gtgcaaccta cagtgactat ctccccatcc 420 aaggcagagg ctctaaacca ccacaacctg ctggtctgtg cggtgacaga tttctatcca 480 agccaggtga aagtccagtg gttccggaat ggccaggagg agacagctgg cgttgtgtcc 540 actcctctta ttaggaacgg agactggacc taccaggtgc tcgtgatgct agagatgaat 600 ctccagcgag gagatgtcta cacctgccgc gtggagcact ccagcctcca gagccccatc 660 ttggtggagt ggcgggcaca gtctgaatct gcccagagca agatgctgag cggtgtcggg 720 ggcttcgtgc tggggctgat cttcctcggg ctgggccttt tcatccgtca caggagtcag 780 aaggggctcg tgcgctgaat cctgaagata ctttggggtt ggtttttgct cttcttaaat 840 gcctgtctgt tcttgcctgg aattcccata cccctgccag cttgttcctc tctgaggtca 900 gatcctacag tgactctgat gcagtcacga gggcgcttcc tgtgatcccc acctcaaggc 960 tctggctgtg aagcttcttc ctgaactgac cccagcgcct ctgcctgagt gcagccagct 1020 gtgtctactc agaccacaag ggattttcct gttcctattt tc 1062 //