ID EU382733; SV 1; linear; genomic DNA; STD; HUM; 792 BP.
XX
AC EU382733;
XX
DT 11-MAR-2008 (Rel. 95, Created)
DT 30-AUG-2009 (Rel. 102, Last updated, Version 2)
XX
DE Homo sapiens MHC class I antigen (HLA-C) gene, HLA-Cw*0401 variant allele,
DE exons 2, 3 and partial cds.
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-792
RX DOI; 10.1111/j.1399-0039.2009.01278.x.
RX PUBMED; 19500316.
RA Han S.H., Heo Y.A., Kwon O.J., Yoon H.R., Lee K.R.;
RT "Identification of a novel HLA-Cw*04 allele, HLA-Cw*040106, by
RT sequence-based typing in the Korean population";
RL Tissue Antigens 74(3):256-257(2009).
XX
RN [2]
RP 1-792
RA Han S.-H., Hur Y., Kwon O.-J.;
RT "Novel Cw*0401 variant allele";
RL Unpublished.
XX
RN [3]
RP 1-792
RA Han S.-H., Hur Y., Kwon O.-J.;
RT ;
RL Submitted (08-JAN-2008) to the INSDC.
RL Molecular Genetics, SMSI, 7-14 Dongbinggo-dong, Yongsan-gu, Seoul 140-809,
RL Korea
XX
DR MD5; d3385e9ba4b55fd81bedb4772b4c2cde.
DR IMGT/HLA; HLA-C*04:01:06; HLA03504.
XX
FH Key Location/Qualifiers
FH
FT source 1..792
FT /organism="Homo sapiens"
FT /chromosome="6"
FT /map="6p21.3"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene <1..>792
FT /gene="HLA-C"
FT /allele="HLA-Cw*0401 variant"
FT mRNA join(<1..270,517..>792)
FT /gene="HLA-C"
FT /allele="HLA-Cw*0401 variant"
FT /product="MHC class I antigen"
FT CDS join(<1..270,517..>792)
FT /codon_start=3
FT /gene="HLA-C"
FT /allele="HLA-Cw*0401 variant"
FT /product="MHC class I antigen"
FT /note="leukocyte antigen C"
FT /db_xref="InterPro:IPR001039"
FT /db_xref="InterPro:IPR011161"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR037055"
FT /db_xref="UniProtKB/TrEMBL:B1PC45"
FT /protein_id="ABY86898.1"
FT /translation="SHSMRYFSTSVSWPGRGEPRFIAVGYVDDTQFVRFDSDAASPRGE
FT PREPWVEQEGPEYWDRETQKYKRQAQADRVNLRKLRGYYNQSEDGSHTLQRMFGCDLGP
FT DGRLLRGYNQFAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQRRAYLEGTC
FT VEWLRRYLENGKETLQRA"
FT exon 1..270
FT /gene="HLA-C"
FT /allele="HLA-Cw*0401 variant"
FT /number=2
FT gap 271..516
FT /estimated_length=246
FT exon 517..>792
FT /gene="HLA-C"
FT /allele="HLA-Cw*0401 variant"
FT /number=3
XX
SQ Sequence 792 BP; 108 A; 165 C; 199 G; 74 T; 246 other;
gctcccactc catgaggtat ttctccacat ccgtgtcctg gcccggccgc ggggagcccc 60
gcttcatcgc agtgggctac gtggacgaca cgcagttcgt gcggttcgac agcgacgccg 120
cgagtccaag aggggagccg cgggagccgt gggtggagca ggaggggccg gagtattggg 180
accgggagac acagaagtac aagcgccagg cacaggctga ccgagtgaac ctgcggaaac 240
tgcgcggcta ctacaaccag agcgaggacg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 300
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 420
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 480
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnggtc tcacaccctc cagaggatgt 540
ttggctgcga cctggggccg gacgggcgcc tcctccgcgg gtataaccag ttcgcctacg 600
acggcaagga ttacatcgcc ctgaacgagg atctgcgctc ctggaccgcc gcggacacgg 660
cggctcagat cacccagcgc aagtgggagg cggcccgtga ggcggagcag cggagagcct 720
acctggaggg cacttgcgtg gagtggctcc gcagatacct ggagaacggg aaggagacgc 780
tgcagcgcgc gg 792
//