ID EU253478; SV 1; linear; genomic DNA; STD; HUM; 1642 BP.
XX
AC EU253478;
XX
DT 31-JAN-2008 (Rel. 94, Created)
DT 17-JUN-2008 (Rel. 96, Last updated, Version 2)
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DE Homo sapiens MHC class I antigen (HLA-A) gene, HLA-A*23new allele, exons 2
DE through 4 and partial cds.
XX
KW .
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OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
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RN [1]
RP 1-1642
RX DOI; 10.1111/j.1399-0039.2008.01041.x.
RX PUBMED; 18380774.
RA Aureli A., Del Beato T., Papola F., Adorno D., Piancatelli D.;
RT "A new HLA-A allele identified in a leukemic patient attending
RT hematopoietic cell transplantation: A*2318";
RL Tissue Antigens 71(6):568-569(2008).
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RN [2]
RP 1-1642
RA Aureli A., Piancatelli D., Del Beato T., Azzarone R., Papola F., Adorno D.;
RT ;
RL Submitted (30-OCT-2007) to the INSDC.
RL CNR, Institute for Organ Transplantation and Immunocytology, P.le
RL Collemaggio, L'Aquila 67100, Italy
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DR MD5; a66309f8fcb3a2006ebc3112dea2e5a6.
DR IMGT/HLA; HLA-A*23:18; HLA03170.
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FH Key Location/Qualifiers
FH
FT source 1..1642
FT /organism="Homo sapiens"
FT /chromosome="6"
FT /map="6p21.3"
FT /isolate="F438"
FT /mol_type="genomic DNA"
FT /country="Italy"
FT /isolation_source="potential bone marrow recipient"
FT /tissue_type="blood"
FT /db_xref="taxon:9606"
FT gene <1..>1642
FT /gene="HLA-A"
FT /allele="HLA-A*23new"
FT mRNA join(<1..270,512..787,1367..>1642)
FT /gene="HLA-A"
FT /allele="HLA-A*23new"
FT /product="MHC class I antigen"
FT CDS join(<1..270,512..787,1367..>1642)
FT /codon_start=3
FT /gene="HLA-A"
FT /allele="HLA-A*23new"
FT /product="MHC class I antigen"
FT /db_xref="InterPro:IPR001039"
FT /db_xref="InterPro:IPR003006"
FT /db_xref="InterPro:IPR003597"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR011161"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="InterPro:IPR037055"
FT /db_xref="UniProtKB/TrEMBL:B0LL97"
FT /protein_id="ABY74323.1"
FT /translation="SHSMRYFSTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRME
FT PRAPWIEQEGPEYWDEETGKVKAHSQTDRENLRIALRYYNQSEAGSHTLQMMFGCDVGS
FT DGRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQITQRKWEAARVAEQLRAYLEGTC
FT VDGLRRYLENGKETLQRTDPPKTHMTHHPISDHEATLRCWALGFYPAEITLTWQQDGED
FT QTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW"
FT exon 1..270
FT /gene="HLA-A"
FT /allele="HLA-A*23new"
FT /number=2
FT gap 271..511
FT /estimated_length=241
FT exon 512..787
FT /gene="HLA-A"
FT /allele="HLA-A*23new"
FT /number=3
FT gap 788..1366
FT /estimated_length=579
FT exon 1367..1642
FT /gene="HLA-A"
FT /allele="HLA-A*23new"
FT /number=4
FT variation 1475
FT /gene="HLA-A"
FT /replace="g"
FT /note="compared to HLA-A*2301"
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SQ Sequence 1642 BP; 171 A; 250 C; 279 G; 122 T; 820 other;
gctcccactc catgaggtat ttctccacat ccgtgtcccg gcccggccgc ggggagcccc 60
gcttcatcgc cgtgggctac gtggacgaca cgcagttcgt gcggttcgac agcgacgccg 120
cgagccagag gatggagccg cgggcgccgt ggatagagca ggaggggccg gagtattggg 180
acgaggagac agggaaagtg aaggcccact cacagactga ccgagagaac ctgcggatcg 240
cgctccgcta ctacaaccag agcgaggccg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 300
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 420
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 480
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn ngttctcaca ccctccagat gatgtttggc 540
tgcgacgtgg ggtcggacgg gcgcttcctc cgcgggtacc accagtacgc ctacgacggc 600
aaggattaca tcgccctgaa agaggacctg cgctcttgga ccgcggcgga catggcggct 660
cagatcaccc agcgcaagtg ggaggcggcc cgtgtggcgg agcagttgag agcctacctg 720
gagggcacgt gcgtggacgg gctccgcaga tacctggaga acgggaagga gacgctgcag 780
cgcacggnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 840
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 900
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 960
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1020
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1080
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1140
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1200
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1260
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1320
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnaccc ccccaagaca 1380
catatgaccc accaccccat ctctgaccat gaggccactc tgagatgctg ggccctgggc 1440
ttctaccctg cggagatcac actgacctgg cagcaggatg gggaggacca gacccaggac 1500
acggagcttg tggagaccag gcctgcaggg gatggaacct tccagaagtg ggcagctgtg 1560
gtggtacctt ctggagagga gcagagatac acctgccatg tgcagcatga gggtctgccc 1620
aagcccctca ccctgagatg gg 1642
//