ID EF640739; SV 1; linear; genomic DNA; STD; HUM; 1022 BP.
XX
AC EF640739;
XX
DT 30-JUN-2007 (Rel. 92, Created)
DT 17-JUN-2008 (Rel. 96, Last updated, Version 3)
XX
DE Homo sapiens MHC class I antigen (HLA-C) gene, HLA-Cw*0716 allele, exons 2
DE through 4 and partial cds.
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-1022
RX DOI; 10.1111/j.1399-0039.2007.00980.x.
RX PUBMED; 18086268.
RA Canossi A., Liberatore G., Del Beato T., Piazza A., Adorno D.;
RT "Identification of the very uncommon allele HLA-Cw*0716 in a Caucasian
RT renal transplant recipient: extension of the exon 4 sequence";
RL Tissue Antigens 71(2):176-178(2008).
XX
RN [2]
RP 1-1022
RA Canossi A., Del Beato T., Piazza A., Liberatore G., Ozzella G., Poggi E.,
RA Adorno D.;
RT "Description of the unknown HLA-Cw*0716 exon 4 in a renal transplant
RT recipient from Italy";
RL Unpublished.
XX
RN [3]
RP 1-1022
RA Canossi A., Del Beato T., Piazza A., Liberatore G., Ozzella G., Poggi E.,
RA Adorno D.;
RT ;
RL Submitted (31-MAY-2007) to the INSDC.
RL Istituto Trapianti D'Organo e l'Immunocitologia, C.N.R., P.le Collemaggio,
RL L'Aquila 67100, Italy
XX
DR MD5; 881fb171baf48b3ecf4d923ed9580e4b.
DR IMGT/HLA; HLA-C*07:16; HLA01588.
XX
FH Key Location/Qualifiers
FH
FT source 1..1022
FT /organism="Homo sapiens"
FT /chromosome="6"
FT /map="6p21.3"
FT /isolate="E770"
FT /mol_type="genomic DNA"
FT /country="Italy"
FT /isolation_source="renal transplant recipient"
FT /tissue_type="blood"
FT /db_xref="taxon:9606"
FT gene <1..>1022
FT /gene="HLA-C"
FT /allele="HLA-Cw*0716"
FT mRNA join(<1..270,371..646,747..>1022)
FT /gene="HLA-C"
FT /allele="HLA-Cw*0716"
FT /product="MHC class I antigen"
FT CDS join(<1..270,371..646,747..>1022)
FT /codon_start=3
FT /gene="HLA-C"
FT /allele="HLA-Cw*0716"
FT /product="MHC class I antigen"
FT /db_xref="InterPro:IPR001039"
FT /db_xref="InterPro:IPR003597"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR011161"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="InterPro:IPR037055"
FT /db_xref="UniProtKB/TrEMBL:A6YQG8"
FT /protein_id="ABR27677.1"
FT /translation="SHSMRYFDTAVSRPGRGEPRFISVGYVDDTQFVRFDSDAASPRGE
FT PRAPWVEQEGPEYWDRETQNYKRQAQADRVSLRNLRGYYNQSEAGSHTLQRMYGCDLGP
FT DGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTAAQITQRKLEAARAAEQLRAYLEGTC
FT VEWLRRYLENGKETLQRAEPPKTHVTHHPLSDHEATLRCWALGFYPAEITLTWQRDGED
FT QTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYTCHMQHEGLQEPLTLSW"
FT exon 1..270
FT /gene="HLA-C"
FT /allele="HLA-Cw*0716"
FT /number=2
FT gap 271..370
FT /estimated_length=unknown
FT exon 371..646
FT /gene="HLA-C"
FT /allele="HLA-Cw*0716"
FT /number=3
FT gap 647..746
FT /estimated_length=unknown
FT exon 747..1022
FT /gene="HLA-C"
FT /allele="HLA-Cw*0716"
FT /number=4
FT /note="similar to the HLA-Cw*07020101 allele"
XX
SQ Sequence 1022 BP; 168 A; 262 C; 283 G; 109 T; 200 other;
gctcccactc catgaggtat ttcgacaccg ccgtgtcccg gcccggccgc ggagagcccc 60
gcttcatctc agtgggctac gtggacgaca cgcagttcgt gcggttcgac agcgacgccg 120
cgagtccgag aggggagccg cgggcgccgt gggtggagca ggaggggccg gagtattggg 180
accgggagac acagaactac aagcgccagg cacaggctga ccgagtgagc ctgcggaacc 240
tgcgcggcta ctacaaccag agcgaggccg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 300
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360
nnnnnnnnnn ggtctcacac cctccagagg atgtatggct gcgacctggg gcccgacggg 420
cgcctcctcc gcgggtatga ccagtccgcc tacgacggca aggattacat cgccctgaac 480
gaggacctgc gctcctggac cgccgcggac accgcggctc agatcaccca gcgcaagttg 540
gaggcggccc gtgcggcgga gcagctgaga gcctacctgg agggcacgtg cgtggagtgg 600
ctccgcagat acctggagaa cgggaaggag acgctgcagc gcgcagnnnn nnnnnnnnnn 660
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 720
nnnnnnnnnn nnnnnnnnnn nnnnnnaacc cccaaagaca cacgtgaccc accaccccct 780
ctctgaccat gaggccaccc tgaggtgctg ggccctgggc ttctaccctg cggagatcac 840
actgacctgg cagcgggatg gggaggacca gacccaggac accgagcttg tggagaccag 900
gccagcagga gatggaacct tccagaagtg ggcagctgtg gtggtgcctt ctggacaaga 960
gcagagatac acgtgccata tgcagcacga ggggctgcaa gagcccctca ccctgagctg 1020
gg 1022
//