ID EF484938; SV 1; linear; genomic DNA; STD; HUM; 791 BP.
XX
AC EF484938;
XX
DT 19-APR-2007 (Rel. 91, Created)
DT 17-JUN-2008 (Rel. 96, Last updated, Version 2)
XX
DE Homo sapiens isolate BY00149 MHC class I antigen (HLA-B) gene, HLA-B*5702
DE variant allele, exons 2, 3 and partial cds.
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-791
RA Lazaro A.M., Cao K., Lynn N., Hurley C.K.;
RT ;
RL Submitted (08-MAR-2007) to the INSDC.
RL Oncology, Georgetown University, 3970 Reservoir Rd, N.W., Washington, DC
RL 20057, USA
XX
DR MD5; 7d2c6b597ededd8c08dc9adeae251884.
DR IMGT/HLA; HLA-B*57:12; HLA02888.
XX
FH Key Location/Qualifiers
FH
FT source 1..791
FT /organism="Homo sapiens"
FT /isolate="BY00149"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene <1..>791
FT /gene="HLA-B"
FT /allele="HLA-B*5702 variant"
FT mRNA join(<1..270,516..>791)
FT /gene="HLA-B"
FT /allele="HLA-B*5702 variant"
FT /product="MHC class I antigen"
FT CDS join(<1..270,516..>791)
FT /codon_start=3
FT /gene="HLA-B"
FT /allele="HLA-B*5702 variant"
FT /product="MHC class I antigen"
FT /db_xref="InterPro:IPR001039"
FT /db_xref="InterPro:IPR011161"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR037055"
FT /db_xref="UniProtKB/TrEMBL:A4USG4"
FT /protein_id="ABO87663.1"
FT /translation="SHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRMA
FT PRAPWIEQEGPEYWDGETRNMKASAQTYRESLRNLRGYYNQSEAGSHIIQVMYGCDVGP
FT DGRLLRGHNQYAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQRRAYLEGLC
FT VEWLRRYLENGKETLQRA"
FT exon 1..270
FT /gene="HLA-B"
FT /allele="HLA-B*5702 variant"
FT /number=2
FT gap 271..515
FT /estimated_length=245
FT exon 516..791
FT /gene="HLA-B"
FT /allele="HLA-B*5702 variant"
FT /number=3
XX
SQ Sequence 791 BP; 107 A; 168 C; 198 G; 73 T; 245 other;
gctcccactc catgaggtat ttctacaccg ccatgtcccg gcccggccgc ggggagcccc 60
gcttcatcgc agtgggctac gtggacgaca cccagttcgt gaggttcgac agcgacgccg 120
cgagtccgag gatggcgccc cgggcgccat ggatagagca ggaggggccg gagtattggg 180
acggggagac acggaacatg aaggcctccg cgcagactta ccgagagagc ctgcggaacc 240
tgcgcggcta ctacaaccag agcgaggccg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 300
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 420
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 480
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnggtct cacatcatcc aggtgatgta 540
tggctgcgac gtggggccgg acgggcgcct cctccgcggg cataaccagt acgcctacga 600
cggcaaggat tacatcgccc tgaacgagga cctgagctcc tggaccgcgg cggacacggc 660
ggctcagatc acccagcgca agtgggaggc ggcccgtgtg gcggagcagc ggagagccta 720
cctggagggc ctgtgcgtgg agtggctccg cagatacctg gagaacggga aggagacgct 780
gcagcgcgcg g 791
//