ID EF447434; SV 1; linear; genomic DNA; STD; HUM; 1843 BP.
XX
AC EF447434;
XX
DT 13-MAR-2007 (Rel. 91, Created)
DT 17-JUN-2008 (Rel. 96, Last updated, Version 3)
XX
DE Homo sapiens MHC class I antigen (HLA-B) gene, HLA-B*40 variant allele,
DE exons 1 through 4 and partial cds.
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-1843
RX DOI; 10.1111/j.1399-0039.2008.01009.x.
RX PUBMED; 18257897.
RA Kwon O.J., Kim J., Dirisala V.R., Xiao R., Park C.;
RT "A new HLA-B*40 variant, B*4073, identified by sequence-based typing in the
RT Korean population";
RL Tissue Antigens 71(3):250-251(2008).
XX
RN [2]
RP 1-1843
RA Hong S.A., Lee J.S., Kwon O.J.;
RT ;
RL Submitted (06-FEB-2007) to the INSDC.
RL Molecular Genetics, BioSewoom Institute of Bioscience & Biotechnology,
RL Wooyoung Technocenter 1F, #273-15, Sungsu 2-ga 3-dong, Sungdong-gu, Seoul
RL 133-831, Republic of Korea
XX
DR MD5; 203bba3a45f643e735a9b0cfae9294cd.
DR IMGT/HLA; HLA-B*40:73; HLA02864.
XX
FH Key Location/Qualifiers
FH
FT source 1..1843
FT /organism="Homo sapiens"
FT /chromosome="6"
FT /map="6p21.3"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene <1..>1843
FT /gene="HLA-B"
FT /allele="HLA-B*40 variant"
FT mRNA join(<1..73,203..472,717..992,1568..>1843)
FT /gene="HLA-B"
FT /allele="HLA-B*40 variant"
FT /product="MHC class I antigen"
FT CDS join(1..73,203..472,717..992,1568..>1843)
FT /codon_start=1
FT /gene="HLA-B"
FT /allele="HLA-B*40 variant"
FT /product="MHC class I antigen"
FT /note="HLA-B heavy chain leader peptide, domain 1, 2 and 3"
FT /db_xref="InterPro:IPR001039"
FT /db_xref="InterPro:IPR003006"
FT /db_xref="InterPro:IPR003597"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR011161"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="InterPro:IPR037055"
FT /db_xref="UniProtKB/TrEMBL:A4GWZ2"
FT /protein_id="ABO21860.1"
FT /translation="MRVTAPRTVLLLLSAALALTETWAGSHSMRYFHTAMSRPGRGEPR
FT FITVGYVDDTLFVRFDSDATSPRKEPRAPWIEQEGPEYWDRETQISKTNTQTYRVSLRN
FT LRGYYNQSEAGSHTLQRMYGCDVGPDGRLLRGHNQYAYDGKDYIALNEDLRSWTAADTA
FT AQISQRKLEAARVAEQLRAYLEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHE
FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY
FT TCHVQHEGLPKPLTLRW"
FT exon <1..73
FT /gene="HLA-B"
FT /allele="HLA-B*40 variant"
FT /number=1
FT gap 74..202
FT /estimated_length=129
FT exon 203..472
FT /gene="HLA-B"
FT /allele="HLA-B*40 variant"
FT /number=2
FT gap 473..716
FT /estimated_length=244
FT exon 717..992
FT /gene="HLA-B"
FT /allele="HLA-B*40 variant"
FT /number=3
FT gap 993..1567
FT /estimated_length=575
FT exon 1568..>1843
FT /gene="HLA-B"
FT /allele="HLA-B*40 variant"
FT /number=4
XX
SQ Sequence 1843 BP; 188 A; 286 C; 294 G; 127 T; 948 other;
atgcgggtca cggcaccccg aaccgtcctc ctgctgctct cggcggccct ggccctgacc 60
gagacctggg ccgnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 120
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 180
nnnnnnnnnn nnnnnnnnnn nngctcccac tccatgaggt atttccacac cgccatgtcc 240
cggcccggcc gcggggagcc ccgcttcatc accgtgggct acgtggacga cacgctgttc 300
gtgaggttcg acagcgacgc cacgagtccg aggaaggagc cgcgggcgcc atggatagag 360
caggaggggc cggagtattg ggaccgggag acacagatct ccaagaccaa cacacagact 420
taccgagtga gcctgcggaa cctgcgcggc tactacaacc agagcgaggc cgnnnnnnnn 480
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 540
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 600
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 660
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnggtc 720
tcacaccctc cagaggatgt acggctgcga cgtggggccg gacgggcgcc tcctccgcgg 780
gcataaccag tacgcctacg acggcaagga ttacatcgcc ctgaacgagg acctgcgctc 840
ctggaccgcc gcggacacgg cggctcagat ctcccagcgc aagttggagg cggcccgtgt 900
ggcggagcag ctgagagcct acctggaggg cgagtgcgtg gagtggctcc gcagatacct 960
ggagaacggg aaggacaagc tggagcgcgc tgnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1020
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1080
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1140
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1200
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1260
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1320
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1380
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1440
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1500
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1560
nnnnnnnacc ccccaaagac acacgtgacc caccacccca tctctgacca tgaggccacc 1620
ctgaggtgct gggccctggg tttctaccct gcggagatca cactgacctg gcagcgggat 1680
ggcgaggacc aaactcagga cactgagctt gtggagacca gaccagcagg agatagaacc 1740
ttccagaagt gggcagctgt ggtggtgcct tctggagaag agcagagata cacatgccat 1800
gtacagcatg aggggctgcc gaagcccctc accctgagat ggg 1843
//