Dbfetch

ID   EF423903; SV 1; linear; genomic DNA; STD; HUM; 1791 BP.
XX
AC   EF423903;
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DT   06-MAR-2008 (Rel. 95, Created)
DT   12-DEC-2012 (Rel. 115, Last updated, Version 2)
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DE   Homo sapiens KIR2DS1 (KIR2DS1) gene, KIR2DS1-variant allele, complete cds.
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KW   .
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-1791
RX   DOI; 10.1016/j.humimm.2008.01.009.
RX   PUBMED; 18396209.
RA   Hou L., Steiner N.K., Chen M., Belle I., Kubit A.L., Ng J., Hurley C.K.;
RT   "Limited allelic diversity of stimulatory two-domain killer cell
RT   immunoglobulin-like receptors";
RL   Hum. Immunol. 69(3):174-178(2008).
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RN   [2]
RP   1-1791
RA   Steiner N.K., Hurley C.K., Kubit A.L.;
RT   ;
RL   Submitted (02-FEB-2007) to the INSDC.
RL   Oncology, Georgetown University Medical Center, 3970 Reservoir Road, NW,
RL   Washington, D.C. 20057, USA
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DR   MD5; 5c93cf0761b7273df386abe3cd353b81.
DR   Ensembl-Gn; ENSG00000275921; homo_sapiens.
DR   Ensembl-Gn; ENSG00000276387; homo_sapiens.
DR   Ensembl-Tr; ENST00000615190; homo_sapiens.
DR   Ensembl-Tr; ENST00000616491; homo_sapiens.
DR   IPD-KIR; KIR2DS1*00501; KIR00252.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1791
FT                   /organism="Homo sapiens"
FT                   /isolate="RDP34RDP47"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT   gap             56..155
FT                   /estimated_length=unknown
FT   gene            <156..>1770
FT                   /gene="KIR2DS1"
FT                   /allele="variant"
FT                   /note="variant of either allele KIR2DS1*002 or KIR2DS1*003"
FT   mRNA            join(<156..189,290..325,426..725,826..1119,1220..1270,
FT                   1371..1475,1576..1628,1729..>1770)
FT                   /gene="KIR2DS1"
FT                   /allele="variant"
FT   CDS             join(156..189,290..325,426..725,826..1119,1220..1270,
FT                   1371..1475,1576..1628,1729..1770)
FT                   /codon_start=1
FT                   /gene="KIR2DS1"
FT                   /allele="variant"
FT                   /product="KIR2DS1"
FT                   /db_xref="GOA:B1N8M6"
FT                   /db_xref="HGNC:HGNC:6333"
FT                   /db_xref="InterPro:IPR003599"
FT                   /db_xref="InterPro:IPR013151"
FT                   /db_xref="InterPro:IPR013783"
FT                   /db_xref="InterPro:IPR036179"
FT                   /db_xref="UniProtKB/TrEMBL:B1N8M6"
FT                   /protein_id="ABS18362.1"
FT                   /translation="MSLLVVSMACVGFFLLQGAWPHEGVHRKPSLLAHPGRLVKSEETV
FT                   ILQCWSDVMFEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMKQDLAGTYRCYGSV
FT                   THSPYQLSAPSDPLDIVIIGLYEKPSLSAQPGPTVLAGENVTLSCSSRSSYDMYHLSRE
FT                   GEAHERRLPAGTKVNGTFQANFPLGPATHGGTYRCFGSFRDSPYEWSKSSDPLLVSVTG
FT                   NPSNSWPSPTEPSSETGNPRHLHVLIGTSVVKIPFTILLFFLLHRWCSDKKNAAVMDQE
FT                   PAGNRTVNSEDSDEQDHQEVSYA"
FT   gap             190..289
FT                   /estimated_length=unknown
FT   gap             326..425
FT                   /estimated_length=unknown
FT   gap             726..825
FT                   /estimated_length=unknown
FT   gap             1120..1219
FT                   /estimated_length=unknown
FT   gap             1271..1370
FT                   /estimated_length=unknown
FT   gap             1476..1575
FT                   /estimated_length=unknown
FT   gap             1629..1728
FT                   /estimated_length=unknown
XX
SQ   Sequence 1791 BP; 227 A; 289 C; 245 G; 230 T; 800 other;
     ctgtgcgctg ctgagctgag ctggggcgcg gccgcctgtc tgcaccggca gcaccnnnnn        60
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       120
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnatgtc gctcttggtc gtcagcatgg       180
     cgtgtgttgn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       240
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnng gttcttcttg       300
     ctgcaggggg cctggccaca tgaggnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       360
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       420
     nnnnngagtc cacagaaaac cttcactcct ggcccaccca ggtcgcctgg tgaaatcaga       480
     agagacagtc atcctgcaat gttggtcaga tgtcatgttt gaacacttcc ttctgcacag       540
     agaggggatg tttaacgaca ctttgcgcct cattggagaa caccatgatg gggtctccaa       600
     ggccaacttc tccatcagtc gcatgaagca agacctggca gggacctaca gatgctacgg       660
     ttctgttact cactccccct atcagttgtc agctcccagt gaccctctgg acatcgtgat       720
     catagnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       780
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnngtcta tatgagaaac       840
     cttctctctc agcccagccg ggccccacgg ttctggcagg agagaatgtg accttgtcct       900
     gcagctcccg gagctcctat gacatgtacc atctatccag ggaaggggag gcccatgaac       960
     gtaggctccc tgcagggacc aaggtcaacg gaacattcca ggccaacttt cctctgggcc      1020
     ctgccaccca tggagggacc tacagatgct tcggctcttt ccgtgactct ccatacgagt      1080
     ggtcaaagtc aagtgaccca ctgcttgttt ctgtcacagn nnnnnnnnnn nnnnnnnnnn      1140
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1200
     nnnnnnnnnn nnnnnnnnng aaacccttca aatagttggc cttcacccac tgaaccaagc      1260
     tccgaaaccg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1320
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn gtaaccccag      1380
     acacctacat gttctgattg ggacctcagt ggtcaaaatc cctttcacca tcctcctctt      1440
     ctttctcctt catcgctggt gctccgacaa aaaaannnnn nnnnnnnnnn nnnnnnnnnn      1500
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1560
     nnnnnnnnnn nnnnnatgct gctgtaatgg accaagagcc tgcagggaac agaacagtga      1620
     acagcgagnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1680
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnga ttctgatgaa      1740
     caagaccatc aggaggtgtc atacgcataa ttggatcact gtgttttcac a               1791
//