Dbfetch

ID   EF379098; SV 1; linear; genomic DNA; STD; HUM; 2082 BP.
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AC   EF379098;
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DT   31-JAN-2008 (Rel. 94, Created)
DT   17-JUN-2008 (Rel. 96, Last updated, Version 3)
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DE   Homo sapiens cell-line RDP73 KIR2DL5B (KIR2DL5B) gene, KIR2DL5B*002variant
DE   allele, complete cds.
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KW   .
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RP   1-2082
RX   DOI; 10.1007/s00251-008-0273-7.
RX   PUBMED; 18461314.
RA   Mulrooney T.J., Hou L., Steiner N.K., Chen M., Belle I., Ng J.,
RA   Hurley C.K.;
RT   "Promoter variants of KIR2DL5 add to diversity and may impact gene
RT   expression";
RL   Immunogenetics 60(6):287-294(2008).
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RN   [2]
RP   1-2082
RA   Hou L., Hurley C.K., Steiner N.K., Belle I.;
RT   "KIR2DL5 novel alleles";
RL   Unpublished.
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RN   [3]
RP   1-2082
RA   Hou L., Hurley C.K., Steiner N.K., Belle I.;
RT   ;
RL   Submitted (22-JAN-2007) to the INSDC.
RL   Oncology/ C.W. Bill Young Department of Defense Marrow Donor Program,
RL   Georgetown University Medical Center, 11333 Woodglen Drive, Rockville, MD
RL   20852, USA
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DR   MD5; 4780086c38e4dac290861e3fddd02602.
DR   IPD-KIR; KIR2DL5B*009; KIR00245.
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FH   Key             Location/Qualifiers
FH
FT   source          1..2082
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /cell_line="RDP73"
FT                   /db_xref="taxon:9606"
FT   gene            <255..>2082
FT                   /gene="KIR2DL5B"
FT                   /allele="KIR2DL5B*002variant"
FT   mRNA            join(<255..288,389..424,525..809,910..1203,1304..1354,
FT                   1455..1559,1660..1712,1813..>2082)
FT                   /gene="KIR2DL5B"
FT                   /allele="KIR2DL5B*002variant"
FT                   /product="KIR2DL5B"
FT   CDS             join(255..288,389..424,525..809,910..1203,1304..1354,
FT                   1455..1559,1660..1712,1813..2082)
FT                   /codon_start=1
FT                   /gene="KIR2DL5B"
FT                   /allele="KIR2DL5B*002variant"
FT                   /product="KIR2DL5B"
FT                   /db_xref="GOA:B0L654"
FT                   /db_xref="InterPro:IPR003599"
FT                   /db_xref="InterPro:IPR013151"
FT                   /db_xref="InterPro:IPR013783"
FT                   /db_xref="InterPro:IPR036179"
FT                   /db_xref="UniProtKB/TrEMBL:B0L654"
FT                   /protein_id="ABM92657.1"
FT                   /translation="MSLMVVSMACVGFFLLQGAWTHEGGQDKPLLSAWPSAVVPRGGHV
FT                   TLLCRSRLGFTIFSLYKEDGVPVPELYNKIFWKSILMGPVTPAHAGTYRCRGSHPRSPI
FT                   EWSAPSNPLVIVVTGLFGKPSLSAQPGPTVRTGENVTLSCSSRSSFDMYHLSREGRAHE
FT                   PRLPAVPSVDGTFQADFPLGPATHGGTYTCFSSLHDSPYEWSDPSDPLLVSVTGNSSSS
FT                   SSSPTEPSSKTGILRHLHILIGTSVAIILFIILFFFLLHCCCSNKKNAAVMDQEPAGDR
FT                   TVNREDSDDQDPQEVTYAQLDHCVFTQTKITSPSQRPKTPPTDTTMYMELPNAKPRSLS
FT                   PAHKHHSQALRGSSRETTALSQNRVASSHVPAAGI"
FT   gap             289..388
FT                   /estimated_length=unknown
FT   gap             425..524
FT                   /estimated_length=unknown
FT   gap             810..909
FT                   /estimated_length=unknown
FT   gap             1204..1303
FT                   /estimated_length=unknown
FT   gap             1355..1454
FT                   /estimated_length=unknown
FT   gap             1560..1659
FT                   /estimated_length=unknown
FT   gap             1713..1812
FT                   /estimated_length=unknown
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SQ   Sequence 2082 BP; 313 A; 404 C; 350 G; 315 T; 700 other;
     gatctgagac gtgttgtgag ttggtcatag tgaaggacgt gaggtgccaa ttctagtgag        60
     aacaatttcc aggaagccgt gttccgctct tgagcaagca tccactgggc ctcatgcaag       120
     gtagaaagag cctgcgtaag tcaccctccc atgatgtagt caacatgtaa gctgcatggg       180
     cagggcgcca aataacatcc tgtgcgctgc tgagctgagc tggggcgcgg ctgcctgtct       240
     gcaccggcag caccatgtcg ctcatggtcg tcagcatggc gtgtgttgnn nnnnnnnnnn       300
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       360
     nnnnnnnnnn nnnnnnnnnn nnnnnnnngg ttcttcttgc tgcagggggc ctggacacat       420
     gaggnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       480
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnngtggac aggacaagcc       540
     cttgctgtct gcctggccca gcgctgtggt gcctcgagga ggacatgtga ctcttctgtg       600
     tcgctctcgt cttgggttta ccatcttcag tctgtacaaa gaagatgggg tgcctgtccc       660
     tgagctctac aacaaaatat tctggaagag catcctcatg ggccctgtga cccctgcaca       720
     cgcagggacc tacagatgtc ggggttcaca cccgcgctcc cccattgagt ggtcggcacc       780
     cagcaacccc ctggtgatcg tggtcacagn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       840
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       900
     nnnnnnnnng tctatttggg aaaccttcac tctcagccca gccgggcccc acggttcgca       960
     caggagagaa cgtgaccttg tcctgcagct ccaggagctc atttgacatg taccatctat      1020
     ccagggaggg gagggcccat gaacctaggc tccctgcagt gcccagcgtc gatggaacat      1080
     tccaggctga ctttcctctg ggccctgcca cccacggagg gacctacaca tgcttcagct      1140
     ctctccatga ctcaccctat gagtggtcag acccgagtga cccactgctt gtttctgtca      1200
     cagnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1260
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnngaaactc ttcaagtagt      1320
     tcatcttcac ccactgaacc aagctccaaa actgnnnnnn nnnnnnnnnn nnnnnnnnnn      1380
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1440
     nnnnnnnnnn nnnngtatcc tcagacacct gcacattctg attgggacct cagtggctat      1500
     catcctcttc atcatcctct tcttctttct ccttcattgc tgctgctcca acaaaaagan      1560
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1620
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnna tgctgctgta atggaccaag      1680
     agcctgccgg ggacagaaca gtgaacaggg agnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1740
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1800
     nnnnnnnnnn nngactctga tgatcaagac cctcaggagg tgacatatgc acagttggat      1860
     cactgcgttt tcacacagac aaaaatcact tccccttctc agaggcccaa gacacctcca      1920
     acagatacca ccatgtacat ggaacttcca aatgctaagc caagatcatt gtctcctgcc      1980
     cataagcacc acagtcaggc cttgagggga tcttctaggg agacaacagc cctgtctcaa      2040
     aaccgggttg ctagctccca tgtaccagca gctggaatct ga                         2082
//