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EBI Dbfetch

ID   EF092416; SV 1; linear; genomic DNA; STD; HUM; 646 BP.
XX
AC   EF092416;
XX
DT   11-DEC-2006 (Rel. 90, Created)
DT   17-JUN-2008 (Rel. 96, Last updated, Version 2)
XX
DE   Homo sapiens MHC class I antigen (HLA-A) gene, HLA-A*11new allele, exons 2,
DE   3 and partial cds.
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-646
RA   Yan L., Zhu F., He J.;
RT   "Identification of a new HLA-A*11 allele by SBT";
RL   Unpublished.
XX
RN   [2]
RP   1-646
RA   Yan L., Zhu f., He J.;
RT   ;
RL   Submitted (29-OCT-2006) to the INSDC.
RL   HLA Typing Lab, The Blood Center of Zhejiang Province, Wulin Road 345,
RL   Hangzhou, Zhejiang 310006, China
XX
DR   MD5; dd20470635446e048b09950a1fd5c8ff.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..646
FT                   /organism="Homo sapiens"
FT                   /chromosome="6"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT   gene            <1..>646
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*11new"
FT   mRNA            <2..>270
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*11new"
FT                   /product="MHC class I antigen"
FT   CDS             <2..>270
FT                   /codon_start=3
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*11new"
FT                   /product="MHC class I antigen"
FT                   /note="coding region disrupted by sequencing gap"
FT                   /db_xref="GOA:A1E124"
FT                   /db_xref="InterPro:IPR001039"
FT                   /db_xref="InterPro:IPR011161"
FT                   /db_xref="InterPro:IPR011162"
FT                   /db_xref="UniProtKB/TrEMBL:A1E124"
FT                   /protein_id="ABL09831.1"
FT                   /translation="SHSMRYFYTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRME
FT                   PRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSED"
FT   exon            2..>270
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*11new"
FT                   /number=2
FT   gap             271..370
FT                   /estimated_length=unknown
FT   mRNA            <371..>646
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*11new"
FT                   /product="MHC class I antigen"
FT   CDS             <371..>646
FT                   /codon_start=3
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*11new"
FT                   /product="MHC class I antigen"
FT                   /note="coding region disrupted by sequencing gap"
FT                   /db_xref="GOA:A1E125"
FT                   /db_xref="IMGT/HLA:A*11:01:06"
FT                   /db_xref="InterPro:IPR001039"
FT                   /db_xref="InterPro:IPR011161"
FT                   /db_xref="InterPro:IPR011162"
FT                   /db_xref="InterPro:IPR027648"
FT                   /db_xref="UniProtKB/TrEMBL:A1E125"
FT                   /protein_id="ABL09832.1"
FT                   /translation="SHTIQIMYGCDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAA
FT                   DMAAQITKRKWEAAHAAEQQRAYLEGRCVEWLRRYLENGKETLQRT"
FT   exon            371..646
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*11new"
FT                   /number=3
XX
SQ   Sequence 646 BP; 110 A; 165 C; 197 G; 74 T; 100 other;
     ggctcccact ccatgaggta tttctacacc tccgtgtccc ggcccggccg cggggagccc        60
     cgcttcatcg ccgtgggcta cgtggacgac acgcagttcg tgcggttcga cagcgacgcc       120
     gcgagccaga ggatggagcc gcgggcgccg tggatagagc aggaggggcc ggagtattgg       180
     gaccaggaga cacggaatgt gaaggcccag tcacagactg accgagtgga cctggggacc       240
     ctgcgcggct actacaacca gagcgaggac nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       300
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       360
     nnnnnnnnnn gttctcacac catccagata atgtatggct gcgacgtggg gcccgacggg       420
     cgcttcctcc gcgggtaccg gcaggacgcc tacgacggca aggattacat cgccctgaac       480
     gaggacctgc gctcttggac cgcggcggac atggcagctc agatcaccaa gcgcaagtgg       540
     gaggcggccc atgcggcgga gcagcagaga gcctacctgg agggccggtg cgtggagtgg       600
     ctccgcagat acctggagaa cgggaaggag acgctgcagc gcacgg                      646
//


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