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EBI Dbfetch

ID   DQ924972; SV 1; linear; genomic DNA; STD; HUM; 791 BP.
XX
AC   DQ924972;
XX
DT   03-OCT-2006 (Rel. 89, Created)
DT   17-JUN-2008 (Rel. 96, Last updated, Version 4)
XX
DE   Homo sapiens MHC class I antigen (HLA-Cw) gene, HLA-Cw*0335 allele, exons
DE   2, 3 and partial cds.
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-791
RA   Hirv K., Skambraks A., Mytilineos J.;
RT   "Characterization of a new HLA-Cw*03 allele";
RL   Unpublished.
XX
RN   [2]
RP   1-791
RA   Hirv K., Skambraks A., Mytilineos J.;
RT   ;
RL   Submitted (29-AUG-2006) to the INSDC.
RL   Transplantation Immunology, IKT Ulm gGmbH, Helmholtzstrasse 10, Ulm 89081,
RL   Germany
XX
DR   MD5; 92f24f485a3cae8dd487ceb57fd86601.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..791
FT                   /organism="Homo sapiens"
FT                   /chromosome="6"
FT                   /map="6p21.3"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT   gene            <1..>791
FT                   /gene="HLA-Cw"
FT                   /allele="HLA-Cw*0335"
FT   mRNA            join(<1..270,516..>791)
FT                   /gene="HLA-Cw"
FT                   /allele="HLA-Cw*0335"
FT                   /product="MHC class I antigen"
FT   CDS             join(<1..270,516..>791)
FT                   /codon_start=3
FT                   /gene="HLA-Cw"
FT                   /allele="HLA-Cw*0335"
FT                   /product="MHC class I antigen"
FT                   /note="similar to HLA-Cw*0313 and HLA-Cw*0317"
FT                   /db_xref="GOA:Q06AC8"
FT                   /db_xref="IMGT/HLA:C*03:35"
FT                   /db_xref="InterPro:IPR001039"
FT                   /db_xref="InterPro:IPR011161"
FT                   /db_xref="InterPro:IPR011162"
FT                   /db_xref="InterPro:IPR027648"
FT                   /db_xref="UniProtKB/TrEMBL:Q06AC8"
FT                   /protein_id="ABI96210.1"
FT                   /translation="SHSMRYFYTAVSRPGRGEPHFIAVGYVDDTQFVRFDSDAASPRGE
FT                   PRAPWVEQEGPEYWDRETQKYKRQAQTDRVSLRNLRGYYNQSEAGSHTLQRMYGCDVGP
FT                   DGRLLRGYDQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQLRAYLEGLC
FT                   VEWLRRYLKNGKETLQRA"
FT   exon            1..270
FT                   /gene="HLA-Cw"
FT                   /allele="HLA-Cw*0335"
FT                   /number=2
FT   variation       270
FT                   /gene="HLA-Cw"
FT                   /replace="a"
FT                   /note="compared to HLA-Cw*0313"
FT   exon            516..791
FT                   /gene="HLA-Cw"
FT                   /allele="HLA-Cw*0335"
FT                   /number=3
FT   variation       533
FT                   /gene="HLA-Cw"
FT                   /replace="t"
FT                   /note="compared to HLA-Cw*0317"
XX
SQ   Sequence 791 BP; 141 A; 257 C; 286 G; 107 T; 0 other;
     gctcccactc catgaggtat ttctacaccg ctgtgtcccg gcccggccgc ggggagcccc        60
     acttcatcgc agtgggctac gtggacgaca cgcagttcgt gcggttcgac agcgacgccg       120
     cgagtccgag aggggagccg cgggcgccgt gggtggagca ggaggggccg gagtattggg       180
     accgggagac acagaagtac aagcgccagg cacagactga ccgagtgagc ctgcggaacc       240
     tgcgcggcta ctacaaccag agcgaggccg gtgagtgacc ccggcccggg gcgcaggtca       300
     cgacccctcc tcatccccca cggacggccc gggtcgcccc aagtctcccg gtctgagatc       360
     caccccgagg ctgcggaacc cgcccagacc ctcgaccgga gagagcccca gtcaccttta       420
     cccggtttca ttttcagttt aggccaaaat ccccgcgggt tggtcggggc ggggcggggc       480
     tcgggggacg gggctgaccg cgggggcggg gccagggtct cacaccctcc agaggatgta       540
     tggctgcgac gtggggcccg acgggcgcct cctccgcggg tatgaccagt acgcctacga       600
     cggcaaggat tacatcgccc tgaacgagga tctgcgctcc tggaccgccg cggacacggc       660
     ggctcagatc acccagcgca agtgggaggc ggcccgtgag gcggagcagc tgagagccta       720
     cctggagggc ctgtgcgtgg agtggctccg cagatacctg aagaatggga aggagacgct       780
     gcagcgcgcg g                                                            791
//


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