Dbfetch
ID DQ303225; SV 1; linear; mRNA; STD; MAM; 1452 BP. XX AC DQ303225; XX DT 14-DEC-2005 (Rel. 86, Created) DT 30-NOV-2006 (Rel. 89, Last updated, Version 2) XX DE Sus scrofa MHC class I antigen (SLA-3) mRNA, SLA-3*0401 allele, complete DE cds. XX KW . XX OS Sus scrofa (pig) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus. XX RN [1] RP 1-1452 RX DOI; 10.1007/s00251-006-0145-y. RX PUBMED; 17039361. RA Ho C.S., Rochelle E.S., Martens G.W., Schook L.B., Smith D.M.; RT "Characterization of swine leukocyte antigen polymorphism by sequence-based RT and PCR-SSP methods in Meishan pigs"; RL Immunogenetics 58(11):873-882(2006). XX RN [2] RP 1-1452 RA Ho C.-S., Smith D.M.; RT ; RL Submitted (23-NOV-2005) to the INSDC. RL Department of Pathology - Transplant Immunology Laboratory, Baylor RL University Medical Center, 3500 Gaston Avenue, Dallas, TX 75246, USA XX DR MD5; e634caaa0e3dc1c5866994a3fd0ae56f. XX FH Key Location/Qualifiers FH FT source 1..1452 FT /organism="Sus scrofa" FT /chromosome="7" FT /mol_type="mRNA" FT /note="breed: Meishan" FT /db_xref="taxon:9823" FT gene 1..1452 FT /gene="SLA-3" FT /allele="SLA-3*0401" FT /note="SLA-3*xd" FT CDS 2..1087 FT /codon_start=1 FT /gene="SLA-3" FT /allele="SLA-3*0401" FT /product="MHC class I antigen" FT /db_xref="GOA:Q8MGQ5" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:Q8MGQ5" FT /protein_id="ABC17924.1" FT /translation="MGPRALFLLLSGALALTGTRAGPHSLRYFDTAVSRPDRGKPRFIE FT VGYVDDTQFVRFDSDAPNPRMEPRVPWIEKEGQEYWDKETENAMGSAQTFRVNLKNLRG FT YYNQSEAGSHTLQSMYGCDVGPDGLLLRGYSQDAYDGADYIALNEDLRSWTAADTAAQI FT TKRKREAADAAEQMRSYLEGACVEWLQKYLQMGKDTLQHAEPPKTHVTRHPSSDLGVTL FT RCWALGFYPKEISLTWQREGQDQSQDMELVETRPSGDGTFQKWAALVVPPGEEQSYTCH FT VQHEGLQEPLTLRWDPPQPPVPIVGIIVGLVLVLVAGAVVTGVVIWRKKRSGEKGGSYT FT QAAGSDSAQGSDVSLTKDPRV" XX SQ Sequence 1452 BP; 287 A; 443 C; 469 G; 253 T; 0 other; catggggccc cgagccctct tcctgctgct ctcgggggcc ctggccctga ctgggacccg 60 ggcgggtccc cactccctga ggtatttcga caccgccgtg tcccggcccg accgcgggaa 120 gccccgtttc atcgaagtcg gctacgtgga cgacacgcag ttcgtgcggt tcgacagcga 180 cgcccccaat ccgcggatgg agcctcgggt gccgtggata gagaaggagg ggcaggagta 240 ttgggataag gagacggaga acgccatggg cagcgcacag actttccgag tgaacctgaa 300 aaacctgcgc ggctactaca accagagcga ggccgggtct cacaccctcc agagcatgta 360 cggctgcgac gtgggaccag acgggctcct cctccgcggg tacagtcagg acgcctacga 420 cggcgccgat tacatcgccc tgaacgagga cctgcgctcc tggaccgcgg cggacacggc 480 ggctcagatc accaagcgca agagggaggc ggccgatgcg gcggagcaaa tgagaagcta 540 cctggagggc gcgtgtgtgg agtggctcca gaaatacctg cagatgggga aggacacgct 600 gcagcacgca gagcctccaa agacacatgt gacccgccac cccagctctg acctcggggt 660 caccttgagg tgctgggccc tgggcttcta ccctaaggag atctccctga cctggcagcg 720 cgagggccag gaccagagcc aggacatgga gctggtggag accaggccct caggggatgg 780 gaccttccag aagtgggcgg ccctggtggt gcctcctgga gaggagcaga gctacacctg 840 ccatgtgcag cacgagggcc tgcaggagcc cctcaccctg agatgggacc ctcctcagcc 900 ccccgtcccc atcgtgggca tcattgttgg cctggttctc gtcctggtcg ctggagccgt 960 ggtgactgga gttgtgatct ggaggaagaa gcgctcaggt gaaaaaggag ggagctacac 1020 tcaggctgca ggcagtgaca gtgcccaggg ctccgatgtg tcccttacca aggatcctag 1080 agtgtgagac agctgccttg tggggactga gtgacacaga tttgttcacg tcccactttg 1140 tgacttcgga tcccctgcct cctgtttctg cagctgcctc tgaaagggtc tgtgttccta 1200 tgagcatcat gagaggaggt ggggaccctg gcccagccct gccccccacg tcccctcctc 1260 accctgacct gtgttctctt tcctgatcca ctttccagct ccaacaagtt ggggggaggc 1320 aggcggcaat ggaccatctc catccttatc ctaaattcat tgccctgact ggtgactgcg 1380 gggaggagcc gaggagacac aggaggccaa ggaagggaac tagcctgacg gcacagttcc 1440 aaaggcaggg tt 1452 //