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EBI Dbfetch

ID   DQ274060; SV 1; linear; genomic DNA; STD; HUM; 246 BP.
XX
AC   DQ274060;
XX
DT   31-DEC-2005 (Rel. 86, Created)
DT   29-SEP-2010 (Rel. 106, Last updated, Version 4)
XX
DE   Homo sapiens MHC class II antigen (HLA-DPA1) gene, HLA-DPA1*01:10 allele,
DE   exon 2 and partial cds.
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-246
RX   DOI; 10.1111/j.1399-0039.2008.01035.x.
RX   PUBMED; 18380777.
RA   Lee K.W.;
RT   "Description of two novel HLA-DPA1 alleles: DPA1*0110 and DPA1*010304";
RL   Tissue Antigens 71(6):575-577(2008).
XX
RN   [2]
RP   1-246
RA   Lee K.W.;
RT   ;
RL   Submitted (01-NOV-2005) to the INSDC.
RL   Hallym Institute for Genome Application, Hallym University, 896
RL   Pyungchon-Dong, Dongan-Gu, Anyang, Kyungki-Do 431-070, Korea
XX
DR   MD5; 16d67aa81fe190a8d536bc7447f677d6.
DR   Ensembl-Gn; ENSG00000168384; homo_sapiens.
DR   Ensembl-Gn; ENSG00000206291; homo_sapiens.
DR   Ensembl-Gn; ENSG00000224103; homo_sapiens.
DR   Ensembl-Gn; ENSG00000228163; homo_sapiens.
DR   Ensembl-Gn; ENSG00000229685; homo_sapiens.
DR   Ensembl-Gn; ENSG00000231389; homo_sapiens.
DR   Ensembl-Gn; ENSG00000235844; homo_sapiens.
DR   Ensembl-Gn; ENSG00000236177; homo_sapiens.
DR   Ensembl-Tr; ENST00000374808; homo_sapiens.
DR   Ensembl-Tr; ENST00000383224; homo_sapiens.
DR   Ensembl-Tr; ENST00000415247; homo_sapiens.
DR   Ensembl-Tr; ENST00000419277; homo_sapiens.
DR   Ensembl-Tr; ENST00000422504; homo_sapiens.
DR   Ensembl-Tr; ENST00000443117; homo_sapiens.
DR   Ensembl-Tr; ENST00000454805; homo_sapiens.
DR   Ensembl-Tr; ENST00000515317; homo_sapiens.
DR   Ensembl-Tr; ENST00000617497; homo_sapiens.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..246
FT                   /organism="Homo sapiens"
FT                   /chromosome="6"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT   gene            <1..>246
FT                   /gene="HLA-DPA1"
FT                   /allele="HLA-DPA1*01:10"
FT   mRNA            <1..>246
FT                   /gene="HLA-DPA1"
FT                   /allele="HLA-DPA1*01:10"
FT                   /product="MHC class II antigen"
FT   CDS             <1..>246
FT                   /codon_start=3
FT                   /gene="HLA-DPA1"
FT                   /allele="HLA-DPA1*01:10"
FT                   /product="MHC class II antigen"
FT                   /db_xref="GOA:P20036"
FT                   /db_xref="HGNC:HGNC:4938"
FT                   /db_xref="IMGT/HLA:DPA1*01:03:04"
FT                   /db_xref="InterPro:IPR001003"
FT                   /db_xref="InterPro:IPR003006"
FT                   /db_xref="InterPro:IPR003597"
FT                   /db_xref="InterPro:IPR007110"
FT                   /db_xref="InterPro:IPR011162"
FT                   /db_xref="InterPro:IPR013783"
FT                   /db_xref="InterPro:IPR014745"
FT                   /db_xref="PDB:3LQZ"
FT                   /db_xref="PDB:4P4K"
FT                   /db_xref="PDB:4P4R"
FT                   /db_xref="PDB:4P57"
FT                   /db_xref="PDB:4P5K"
FT                   /db_xref="PDB:4P5M"
FT                   /db_xref="UniProtKB/Swiss-Prot:P20036"
FT                   /protein_id="ABB88406.1"
FT                   /translation="DHVSTYAAFVQTHRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEF
FT                   GQAFSFEAQGGLANIAILNNNLNTLIQRSNHTQATN"
FT   exon            1..246
FT                   /gene="HLA-DPA1"
FT                   /allele="HLA-DPA1*01:10"
FT                   /number=2
XX
SQ   Sequence 246 BP; 64 A; 54 C; 64 G; 64 T; 0 other;
     cggaccatgt gtcaacttat gccgcgtttg tacagacgca tagaccaaca ggggagttta        60
     tgtttgaatt tgatgaagat gagatgttct atgtggatct ggacaagaag gagaccgtct       120
     ggcatctgga ggagtttggc caagcctttt cctttgaggc tcagggtggg ctggctaaca       180
     ttgctatatt gaacaacaac ttgaatacct tgatccagcg ttccaaccac actcaggcca       240
     ccaacg                                                                  246
//


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