Dbfetch

Dbfetch

ID   DQ211540; SV 1; linear; mRNA; STD; VRT; 1680 BP.
XX
AC   DQ211540;
XX
DT   23-OCT-2005 (Rel. 85, Created)
DT   10-MAY-2007 (Rel. 91, Last updated, Version 3)
XX
DE   Sparus aurata MHC class I alpha antigen (Spau-UAA) mRNA, Spau-UAA*01
DE   allele, complete cds.
XX
KW   .
XX
OS   Sparus aurata (gilthead seabream)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC   Eupercaria; Spariformes; Sparidae; Sparus.
XX
RN   [1]
RP   1-1680
RX   DOI; 10.1016/j.fsi.2006.08.005.
RX   PUBMED; 17052917.
RA   Cuesta A., Meseguer J., Esteban M.A.;
RT   "Cloning and regulation of the major histocompatibility class I alpha gene
RT   in the teleost fish gilthead seabream";
RL   Fish Shellfish Immunol 22(6):718-726(2007).
XX
RN   [2]
RP   1-1680
RA   Cuesta A.;
RT   ;
RL   Submitted (19-SEP-2005) to the INSDC.
RL   Cell Biology, University of Murcia, Murcia 30100, Spain
XX
DR   MD5; 6843d67e9d4ec69ab4b04faf5e65a27b.
DR   IMGT/LIGM; DQ211540.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1680
FT                   /organism="Sparus aurata"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:8175"
FT   gene            1..1680
FT                   /gene="Spau-UAA"
FT                   /allele="Spau-UAA*01"
FT   CDS             97..1221
FT                   /codon_start=1
FT                   /gene="Spau-UAA"
FT                   /allele="Spau-UAA*01"
FT                   /product="MHC class I alpha antigen"
FT                   /note="major histocompatibility receptor"
FT                   /db_xref="GOA:Q38LF8"
FT                   /db_xref="InterPro:IPR001039"
FT                   /db_xref="InterPro:IPR003597"
FT                   /db_xref="InterPro:IPR007110"
FT                   /db_xref="InterPro:IPR011161"
FT                   /db_xref="InterPro:IPR011162"
FT                   /db_xref="InterPro:IPR013783"
FT                   /db_xref="InterPro:IPR036179"
FT                   /db_xref="InterPro:IPR037055"
FT                   /db_xref="UniProtKB/TrEMBL:Q38LF8"
FT                   /protein_id="ABB04087.1"
FT                   /translation="MRFLVFLALLGTGLHDAAAVTHSLKYFYTGSSGVPNFPEFVTVGM
FT                   VDELQIDYYDSNTKRAQAKQDWMSRVIKEDPQYLERNTQTYMGNEPGFKANIDILKPRF
FT                   NQTGGVHVFQMMVGCEWDDETKQVNGFWQYGYDGEDFIAFDMKAETWIAPKPQAVITKN
FT                   KWDHIKADIEYRKQYLTQICPDWVKKYVDYGRNSLLRTDLPSVSLLQKTPSSPVSCLAT
FT                   GFYPHRASLVWRKDGEELHEEVDHGEILPNHDGTFQMSVDLKLSSVTPEDWTRYDCVFQ
FT                   LSGVNEDIITKLDKAVIITNKGKTGIRSVDEKLNTTAIIIAAVVVSAVFLLAGVVAYKR
FT                   REAICTSSSDNKSNKSEQSELSEPEQKKTLLPNA"
XX
SQ   Sequence 1680 BP; 485 A; 370 C; 378 G; 447 T; 0 other;
     cagccctgga gcgccaagag gacggaggat attcagactg tctgtgataa aagaataata        60
     tcattctaat taactcttca gaatcgacag ttcaccatga ggttcttggt gtttctggct       120
     ctcctgggaa caggtctaca tgacgcggcg gcagtgactc actctctgaa gtatttctac       180
     actggatctt ctggagtccc aaacttccca gagtttgtca ctgttgggat ggttgatgaa       240
     cttcagatag attactatga cagtaacacc aagagagcac aagccaaaca ggactggatg       300
     agcagagtca ttaaagagga tcctcagtat ctggagagaa acactcagac ctatatgggt       360
     aacgagccgg gcttcaaagc caacattgac attttaaagc cacgcttcaa ccaaactgga       420
     ggtgtccatg ttttccagat gatggttggc tgtgagtggg atgatgagac gaaacaggtc       480
     aatggttttt ggcagtatgg ttatgatgga gaagacttca tagcatttga catgaaggca       540
     gagacatgga tcgctccaaa accacaggct gtcatcacca aaaacaaatg ggatcatatt       600
     aaagctgata ttgaatacag aaagcagtac ctcacccaga tttgtcctga ctgggttaag       660
     aagtatgtgg actatgggag gaactctctg ctgagaacag atcttccctc agtgtctctc       720
     ctccagaaga ctccctcctc tccagtcagc tgcctcgcta caggtttcta ccctcacaga       780
     gcctcactcg tctggaggaa agatggagag gagcttcatg aggaggtgga ccacggagag       840
     atcctcccca accacgatgg aaccttccag atgagtgttg acctgaaact ttcatcagtc       900
     acacctgaag actggacgag gtacgactgt gtgtttcagc tctctggtgt gaacgaggac       960
     atcatcacca aactggacaa agcagtgatc ataaccaaca aaggaaagac tggaatcaga      1020
     agtgttgacg agaaacttaa cacgacggcc atcatcatcg ctgcagtggt tgtttctgct      1080
     gttttcctcc tcgctggagt ggtggcttac aagaggagag aagccatctg cacttcatcc      1140
     agtgacaaca agtccaacaa atctgagcag tctgagctgt ctgagcctga acagaagaaa      1200
     acactcctac caaacgcata aacacagttt ctggatggat tctgcactgg aacaatggat      1260
     gctgtggtcg tctctctgtg ttcctcctgg tgatgaacct ccctcctcct ctgtctcact      1320
     gctcactggg attgactcca gtcctcctcc tctctctgca ggaggagcag gataagaact      1380
     gtatggatgg agtttagtat cactgtgggg agctttcatg atttgaatgt aattcattgg      1440
     acacatattt cagtctggtt aatgctacat ctctacatgt gaccctatga ccacatacat      1500
     acacaaaata tacagtaagc atcagaacca aatttatggt ccagttgtgt aatatatatt      1560
     tctatatata tttcaggctg aagcaaatta tttaggtttt tcttaattaa tcttgaatat      1620
     tttgtttttt tgtgtttaat aaaacctctc ttgatctgtt ttgacaaaaa aaaaaaaaaa      1680
//