Dbfetch
ID DQ188807; SV 1; linear; genomic DNA; STD; HUM; 3321 BP.
XX
AC DQ188807;
XX
DT 26-SEP-2005 (Rel. 85, Created)
DT 17-JUN-2008 (Rel. 96, Last updated, Version 3)
XX
DE Homo sapiens nonfunctional MHC class I antigen (HLA-C) gene, HLA-Cw*03NE
DE allele, exons 1 through 8.
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-3321
RA Alonso-Nieto M., Vicario J.L.;
RT "New HLA class I alleles";
RL Unpublished.
XX
RN [2]
RP 1-3321
RA Alonso-Nieto M., Vicario J.L.;
RT ;
RL Submitted (31-AUG-2005) to the INSDC.
RL Histocompatibilidad, Centro de Transfusion de Madrid, Av de la Democracia
RL s/n, Madrid 28032, Spain
XX
DR MD5; b3a7cb20db02d1256c2106d420e765fa.
DR IMGT/HLA; HLA-C*03:20N; HLA02346.
XX
FH Key Location/Qualifiers
FH
FT source 1..3321
FT /organism="Homo sapiens"
FT /chromosome="6"
FT /map="6p21.3"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene <257..>3150
FT /gene="HLA-C"
FT /allele="HLA-Cw*03NE"
FT misc_feature 257..3150
FT /gene="HLA-C"
FT /allele="HLA-Cw*03NE"
FT /note="nonfunctional MHC class I antigen; null allele due
FT to premature stop codon in exon 1"
FT exon <257..329
FT /gene="HLA-C"
FT /allele="HLA-Cw*03NE"
FT /number=1
FT exon 460..729
FT /gene="HLA-C"
FT /allele="HLA-Cw*03NE"
FT /number=2
FT exon 975..1250
FT /gene="HLA-C"
FT /allele="HLA-Cw*03NE"
FT /number=3
FT exon 1838..2113
FT /gene="HLA-C"
FT /allele="HLA-Cw*03NE"
FT /number=4
FT exon 2235..2354
FT /gene="HLA-C"
FT /allele="HLA-Cw*03NE"
FT /number=5
FT exon 2794..2826
FT /gene="HLA-C"
FT /allele="HLA-Cw*03NE"
FT /number=6
FT exon 2934..2981
FT /gene="HLA-C"
FT /allele="HLA-Cw*03NE"
FT /number=7
FT exon 3146..>3150
FT /gene="HLA-C"
FT /allele="HLA-Cw*03NE"
FT /number=8
XX
SQ Sequence 3321 BP; 617 A; 964 C; 1039 G; 701 T; 0 other;
cggggctctc agggtctcag gctccaaggg ccgtgtctgc actggggagg cgccgcgttg 60
aggattctcc actcccctga gtttcacttc ttctcccaac ctgcgtcggg tccttcttcc 120
tgaatactca tgacgcgtcc ccaattccca ctcccattgg gtgtcggatt ctagagaagc 180
caatcagcgt ctccgcagtc ccggttctga agtccccagt cacccacccg gactcagatt 240
ctccccagac gccgagatgc gggtcatggc gccctgaacc ctcatcctgc tgctctcggg 300
agccctggcc ctgaccgaga cctgggccgg tgagtgcggg gttgggaggg aatcggcctc 360
tgcggagagg agcgaggggc ccgcccggcg agggcgcagg acccggggag ccgcgcaggg 420
aggagggtcg ggcgggtctc agcccctcct cgcccccagg ctcccactcc atgaggtatt 480
tctacaccgc tgtgtcccgg cccggccgcg gggagcccca cttcatcgca gtgggctacg 540
tggacgacac gcagttcgtg cggttcgaca gcgacgccgc gagtccgaga ggggagccgc 600
gggcgccgtg ggtggagcag gaggggccgg agtattggga ccgggagaca cagaagtaca 660
agcgccaggc acagactgac cgagtgagcc tgcggaacct gcgcggctac tacaaccaga 720
gcgaggccag tgagtgaccc cggcccgggg cgcaggtcac gacccctcct catcccccac 780
ggacggcccg ggtcgcccca agtctcccgg tctgagatcc accccgaggc tgcggaaccc 840
gcccagaccc tcgaccggag agagccccag tcacctttac ccggtttcat tttcagttta 900
ggccaaaatc cccgcgggtt ggtcggggcg gggcggggct cgggggacgg ggctgaccgc 960
gggggcgggg ccagggtctc acatcatcca gaggatgtat ggctgcgacg tggggcccga 1020
cgggcgcctc ctccgcgggt atgaccagta cgcctacgac ggcaaggatt acatcgccct 1080
gaacgaggat ctgcgctcct ggaccgccgc ggacacggcg gctcagatca cccagcgcaa 1140
gtgggaggcg gcccgtgagg cggagcagct gagagcctac ctggagggcc tgtgcgtgga 1200
gtggctccgc agatacctga agaatgggaa ggagacgctg cagcgcgcgg gtaccagggg 1260
cagtggggag ccttccccat ctcctgtaga tctcccggga tggcctccca cgaggagggg 1320
aggaaaatgg gatcagcgct agaatatcgc cctcccttga atggagaatg ggatgagttt 1380
tcctgagttt cctctgaggg ccccctctgc tctctaggac aattaaggga tgaagtcctt 1440
gaggaaatgg aggggaagac agtccctaga atactgatca ggggtcccct ttgaccactt 1500
tgaccactgc agcagctgtg gtcaggctgc tgacctttct ctcaggcctt gttctctgcc 1560
tcacgctcaa tgtgtttgaa ggtttgattc cagcttttct gagtccttcg gcctccactc 1620
aggtcaggac cagaagtcgc tgttcctccc tcagagacta gaactttcca atgaatagga 1680
gattatccca ggtgcctgtg tccaggctgg cgtctgggtt ctgtgccccc ttccccaccc 1740
caggtgtcct gtccgttctc aggatggtca catgggcgct gttggagtgt cgcaagagag 1800
atacaaagtg tctgaatttt ctgactcttc ccgtcagaac acccaaagac acacgtgacc 1860
caccatcccg tctctgacca tgaggccacc ctgaggtgct gggccctggg cttctaccct 1920
gcggagatca cactgacctg gcagtgggat ggggaggacc aaactcagga cactgagctt 1980
gtggagacca ggccagcagg agatggaacc ttccagaagt gggcagctgt ggtggtgcct 2040
tctggagaag agcagagata cacgtgccat gtgcagcacg aggggctgcc ggagcccctc 2100
accctgagat ggggtaagga gggggatgag gggtgatgtg tcttctcagg gaaagcagaa 2160
gtcctggagc ccttcagcca ggtcagggct gaggcttggg ggtcagggcc cctcaccttc 2220
ccctcctttc ccagagccgt cttcccagcc caccatcccc atcgtgggca tcgttgctgg 2280
cctggctgtc ctggctgtcc tagctgtcct aggagctgtg gtggctgttg tgatgtgtag 2340
gaggaagagc tcaggtaggg aaggggtgag gagtggggtc tgggttttct tgttccactg 2400
ggagtttcaa gccccaggta gaagtgtgcc ccacctcgtt actggaagca ccatccacac 2460
atgggccatc ccagcctggg accctgtgtg ccagcactta ctctgttgtg aagcacatga 2520
caatgaagga cagatgtatc accttgatga ttatggtgtt ggggtccttg attccagcat 2580
tcatgagtca ggggaaggtc cctgctaagg acagacctta ggagggcagt tgctccagaa 2640
cccacagctg ctttccccgt gtttcctgat cctgccctgg gtctgcagtc atagttctgg 2700
aaacttctct tgggtccaag actaggaggt tcccctaaga tcgcatggcc ctgactcctc 2760
cctgtcccct cacagggcat tttcttccca caggtggaaa aggagggagc tgctctcagg 2820
ctgcgtgtaa gtgatggcgg tgggcgtgtg gaggagctca cccaccccat aattcctctt 2880
gtcccacatc tcctgcgggc tctgaccagg tctttttttt tgttctaccc cagccagcaa 2940
cagtgcccag ggctctgatg agtctctcat cgcttgtaaa ggtgagattc tggggagctg 3000
aagtggtcgg gggtggggca gagggaaaag gcctaggtaa tggggatcct ttgattggga 3060
cgtttcgaat gtgtggtgag ctgttcagag tgtgatcact taccatgact gacctgaatt 3120
tgttcatgac tattgtgttc tgtagcctga gacagctgcc tgtgtgggac tgagatgcag 3180
gatttcttca cacctctcct ttgtgacttc aagagcctct ggcatctctt tctgcaaagg 3240
catctgaatg tgtctgcgtt cctgttagca taatgtgagg aggtggacag acagcccacc 3300
cccgtgtcca ccgtgacccc t 3321
//