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EBI Dbfetch

ID   AH015143; SV 2; linear; genomic DNA; STD; HUM; 646 BP.
XX
AC   AH015143; DQ135947-DQ135948;
XX
DT   20-JUL-2011 (Rel. 109, Created)
DT   20-JUL-2011 (Rel. 109, Last updated, Version 1)
XX
DE   Homo sapiens MHC class I antigen (HLA-Cw) gene, HLA-Cw*1701 variant allele,
DE   partial cds.
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-646
RX   DOI; 10.1111/j.1399-0039.2006.00728.x.
RX   PUBMED; 17212710.
RA   Tu B., Mack S.J., Lazaro A., Lancaster A., Thomson G., Cao K., Chen M.,
RA   Ling G., Hartzman R., Ng J., Hurley C.K.;
RT   "HLA-A, -B, -C, -DRB1 allele and haplotype frequencies in an African
RT   American population";
RL   Tissue Antigens 69(1):73-85(2007).
XX
RN   [2]
RP   1-646
RA   Lazaro A.M., Tu B., Hurley C.K.;
RT   "Novel HLA-Class I allele";
RL   Unpublished.
XX
RN   [3]
RP   1-646
RA   Lazaro A.M., Tu B., Hurley C.K.;
RT   ;
RL   Submitted (19-JUL-2005) to the INSDC.
RL   Oncology, Georgetown University, 3970 Reservoir Rd., Washington, DC 20057,
RL   USA
XX
CC   On or before Jul 19, 2011 this sequence version replaced
CC   gi:71913265, gi:71913266, gi:71913264.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..646
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT   gene            <1..>646
FT                   /gene="HLA-Cw"
FT                   /allele="HLA-Cw*1701 variant"
FT   mRNA            join(<1..270,371..>646)
FT                   /gene="HLA-Cw"
FT                   /allele="HLA-Cw*1701 variant"
FT                   /product="MHC class I antigen"
FT   CDS             join(<1..270,371..>646)
FT                   /codon_start=3
FT                   /gene="HLA-Cw"
FT                   /allele="HLA-Cw*1701 variant"
FT                   /product="MHC class I antigen"
FT                   /db_xref="GOA:Q45FZ2"
FT                   /db_xref="InterPro:IPR001039"
FT                   /db_xref="InterPro:IPR011161"
FT                   /db_xref="InterPro:IPR011162"
FT                   /db_xref="InterPro:IPR027648"
FT                   /db_xref="UniProtKB/TrEMBL:Q45FZ2"
FT                   /protein_id="AAZ53372.1"
FT                   /translation="SHSMRYFYTAVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRGE
FT                   PRAPWVEQEAPEYWDRETQKYKRQAQADRVNLRKLRGYYNQSEAGSHTIQRMYGCDLGP
FT                   DGRLLRGYNQFAYDGKDYIALNEDLRSWTAADTAAQISQRKLEAAREAEQLRAYLEGEC
FT                   VEWLRGYLENGKETLQRA"
FT   exon            1..270
FT                   /gene="HLA-Cw"
FT                   /allele="HLA-Cw*1701 variant"
FT                   /number=2
FT   gap             271..370
FT                   /estimated_length=unknown
FT   exon            371..646
FT                   /gene="HLA-Cw"
FT                   /allele="HLA-Cw*1701 variant"
FT                   /number=3
XX
SQ   Sequence 646 BP; 106 A; 168 C; 199 G; 73 T; 100 other;
     gctcccactc catgaggtat ttctacaccg ccgtgtcccg gcccggccgc ggagagcccc        60
     gcttcatcgc agtgggctac gtggacgaca cgcagttcgt gcggttcgac agcgacgccg       120
     cgagtccgag aggggagccg cgggcgccgt gggtggagca ggaggcgccg gagtattggg       180
     accgggagac acagaagtac aagcgccagg cacaggctga ccgagtgaac ctgcggaaac       240
     tgcgcggcta ctacaaccag agcgaggccg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       300
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       360
     nnnnnnnnnn gttctcacac catccagagg atgtatggct gcgacctggg gcccgacggg       420
     cgcctcctcc gcgggtataa ccagttcgcc tacgacggca aggattacat cgccctgaac       480
     gaggacctgc gctcctggac cgcggcggac acggcggctc agatctccca gcgcaagttg       540
     gaggcggccc gtgaggcgga gcagctgaga gcctacctgg agggcgagtg cgtggagtgg       600
     ctccgcggat acctggagaa cgggaaggag acgctgcagc gcgcgg                      646
//


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