Dbfetch

Dbfetch

ID   D58386; SV 1; linear; mRNA; STD; VRT; 1258 BP.
XX
AC   D58386;
XX
DT   07-JUL-1995 (Rel. 44, Created)
DT   21-JAN-1999 (Rel. 58, Last updated, Version 4)
XX
DE   Oncorhynchus gorbuscha Ongo 92H gene for MHC class I (alpha 1, 2, 3,
DE   transmembrane and cytoplasmic domain), complete cds.
XX
KW   major histocompatibility complex antigen class I; MHC class I; Ongo 92H.
XX
OS   Oncorhynchus gorbuscha (pink salmon)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes;
OC   Salmonidae; Salmoninae; Oncorhynchus.
XX
RN   [1]
RP   1-1258
RA   Katagiri T.;
RT   ;
RL   Submitted (21-JUN-1995) to the INSDC.
RL   Takayuki Katagiri, Tokyo University of Fisheries, Laboratory of Genetics
RL   and Biochemistry; Konan 4-5-7, Minato-ku, Tokyo 108, Japan
RL   (Tel:03-5463-0556, Fax:03-5463-0690)
XX
RN   [2]
RP   1-1258
RA   Katagiri T., Hirono I., Sakaki M., Aoki T., Hashimoto K., Kurosawa Y.;
RT   "Isolation of major histocompatibility complex antigen class I cDNA from
RT   pink salmon Oncorhynchus gorbuscha";
RL   Unpublished.
XX
RN   [3]
RX   DOI; 10.1016/0145-305X(96)00010-9.
RX   PUBMED; 8955596.
RA   Katagiri T., Hirono I., Aoki T., Sakai M.;
RT   "Isolation of major histocompatibility complex class I cDNA from pink
RT   salmon (Oncorhynchus gorbuscha)";
RL   Dev Comp Immunol 20(3):217-228(1996).
XX
DR   MD5; ed9445b471df26c17e25a7e8ac90166b.
DR   EuropePMC; PMC3036124; 21637434.
DR   IMGT/LIGM; D58386.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1258
FT                   /organism="Oncorhynchus gorbuscha"
FT                   /mol_type="mRNA"
FT                   /tissue_type="kidney"
FT                   /db_xref="taxon:8017"
FT   CDS             1..1020
FT                   /codon_start=1
FT                   /gene="Ongo 92H"
FT                   /product="MHC class I"
FT                   /note="alpha 1 domain: nt58-324"
FT                   /note="alpha 2 domain: nt325-603"
FT                   /note="alpha 3 domain: nt604-879"
FT                   /note="transmembrane and cytoplasmic domain: nt880-1017"
FT                   /db_xref="GOA:P79570"
FT                   /db_xref="InterPro:IPR001039"
FT                   /db_xref="InterPro:IPR003597"
FT                   /db_xref="InterPro:IPR007110"
FT                   /db_xref="InterPro:IPR011161"
FT                   /db_xref="InterPro:IPR011162"
FT                   /db_xref="InterPro:IPR013783"
FT                   /db_xref="InterPro:IPR036179"
FT                   /db_xref="InterPro:IPR037055"
FT                   /db_xref="UniProtKB/TrEMBL:P79570"
FT                   /protein_id="BAA09553.1"
FT                   /translation="MKGIILLVLGIGLLHTASAVTHSLKYFFTTSSEVPNFPEFVVVGM
FT                   VDGVQMVHYDSNSQRAVPKQDWMNKAAETLPQYWERETGICKGTQQTFKANIDILKQRF
FT                   NQSGGVHIVQWMYGCEWDDEAGATEGFVQHGYDGEGFIAFDLKTTKWVAPSHRAVFTKL
FT                   KWDINTPDNDQNKNYYTQICIEWLKKYVDYGKSTLMRTVSPSVSLFQKNPSSPVTCHAT
FT                   GFYPSDVMVSWQKDGQDHHEDVEYGETLPNHDGTFQKSSHLTVTPEDRKNNKYQCVVQV
FT                   KGIKDDFIRVLPDQDAANIVPIIVGVVALLLSIVAVVVGSSLEEEEQERLCSGQHFRH"
FT   sig_peptide     1..57
FT                   /experiment="experimental evidence, no additional details
FT                   recorded"
XX
SQ   Sequence 1258 BP; 350 A; 285 C; 332 G; 291 T; 0 other;
     atgaagggta ttatcttgct ggtgctggga ataggccttc ttcatacagc atctgctgtg        60
     actcactccc tgaagtattt cttcaccaca tcttctgaag ttcccaactt cccagagttc       120
     gtggttgtgg ggatggtgga tggtgttcag atggttcact atgacagcaa cagccagaga       180
     gcagtgccca aacaggactg gatgaacaag gcagcagaaa cactaccaca gtactgggag       240
     agggagacag ggatttgcaa gggtacccag cagactttca aagccaacat cgatatttta       300
     aagcagcgtt ttaaccaaag tggaggtgtg cacattgtcc agtggatgta tggttgtgag       360
     tgggatgatg aggctggagc cacagagggg tttgtccagc atgggtatga tggagagggt       420
     ttcatagcgt ttgacctgaa gacaaccaaa tgggtcgccc caagccacag ggcagtcttc       480
     accaaactaa agtgggacat taacacacct gacaatgacc agaacaaaaa ctactacacc       540
     cagatctgca ttgagtggct gaagaagtat gtggactatg ggaagagcac tctgatgagg       600
     acagtctctc cgtcagtgtc tctgttccag aagaacccct cctctccagt gacctgccac       660
     gcgacaggtt tctaccccag tgatgtcatg gtgtcctggc agaaagacgg acaagatcac       720
     catgaagatg tggagtatgg agagactctc cccaaccatg atggaacctt ccagaaaagc       780
     tcccacctga cagtgacgcc tgaggacagg aagaacaaca agtatcagtg tgtggttcaa       840
     gtcaagggta tcaaggatga cttcatcagg gttctgcctg accaggatgc cgccaacatt       900
     gttcccatca ttgtaggggt ggtagctctc ctcctgtcca tcgttgctgt tgttgttggg       960
     tcgtcattgg aagaagagga gcaagaaagg ctttgttccg gccagcactt ccgacactga      1020
     ctctgacaac tctgggagag ctgcccagat gacttgcaga agacctctgc acttctgtaa      1080
     cattcagaaa ggtgttgaag aggaacttct caagaacata acacacttat aattgcacac      1140
     acacacacac acacaacaca ggaggttggt gtcaccttaa ttgggtagag cgggcttgtg      1200
     gtaattgcta gagtggaatg agtggaatgg taccaaatac attcaaacac atggtttg        1258
//