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EBI Dbfetch

ID   CL440255; SV 1; linear; genomic DNA; GSS; MAM; 410 BP.
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AC   CL440255;
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DT   20-AUG-2004 (Rel. 80, Created)
DT   16-MAY-2010 (Rel. 104, Last updated, Version 6)
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DE   RPCI44_300M7.f RPCI-44 Sus scrofa genomic clone RPCI44_300M7, genomic
DE   survey sequence.
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KW   GSS.
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OS   Sus scrofa (pig)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Suina; Suidae; Sus.
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RN   [1]
RP   1-410
RX   DOI; 10.1080/10495390701807634.
RX   PUBMED; 18228174.
RA   Rogatcheva M.B., Chen K., Larkin D.M., Meyers S.N., Marron B.M., He W.,
RA   Schook L.B., Beever J.E.;
RT   "Piggy-BACing the human genome I: constructing a porcine BAC physical map
RT   through comparative genomics";
RL   Anim. Biotechnol. 19(1):28-42(2008).
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DR   MD5; e3b8aa00e250bee0f50c03987fca1c25.
DR   EuropePMC; PMC2323232; 17625002.
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CC   Other_GSSs: RPCI44_300M7.r
CC   Contact: Lawrence B. Schook
CC   Department of Animal Sciences
CC   University of Illinois at Urbana Champaign
CC   1201 W. Gregory Dr., Urbana, IL 61801, USA
CC   Tel: 217 265 5326
CC   Fax: 217 244 5617
CC   Email: schook@uiuc.edu
CC   Clones are derived from the porcine BAC library RPCI-44
CC   (http://www.bacpac.chori.org/porcine242.htm). For BAC library
CC   availability, please contact Pieter de Jong (pdejong@chori.org).
CC   Clones may be purchased from BACPAC Resources
CC   (http://BACPACorders.chori.org). This work was undertaken as part
CC   of the International Swine Genome Sequencing Consortium by
CC   University of Illinois at Urbana Champaign, USA with funds provided
CC   by grant No. AG2002-34480-11828 from USDA-CSREES and
CC   AG2001-35205-09965 from USDA/NRI (Livestock Genome Sequencing
CC   Initiative)
CC   Plate: 300  row: M  column: 7
CC   Seq primer: T7
CC   Class: BAC ends.
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FH   Key             Location/Qualifiers
FH
FT   source          1..410
FT                   /organism="Sus scrofa"
FT                   /strain="four pigs (breed: 37.5% Yorks Landrace and 25%
FT                   Meishan)"
FT                   /mol_type="genomic DNA"
FT                   /sex="male"
FT                   /clone_lib="RPCI-44"
FT                   /clone="RPCI44_300M7"
FT                   /cell_type="blood"
FT                   /note="Vector: pTARBAC2; Site_1: EcoRI; Site_2: EcoRI;
FT                   porcine male BAC library produced by Pieter de Jong"
FT                   /db_xref="taxon:9823"
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SQ   Sequence 410 BP; 134 A; 91 C; 73 G; 110 T; 2 other;
     aattcacact gaattcaaag ggaaacctgg gtctgtgaag agccttgtgt cggccaagcc        60
     aaggggatca cagatttcct tttaatgtcc aatctcactt tctacctaac tttgttcaaa       120
     taaaaaccag gttcgaaagc caatcaattc aatgaacacc ttcccacaga gaaatcctca       180
     accnnacgta gctaccccag gaaaaaatgt gacaggcatc taaatacatt ctaagaatcc       240
     tggctgaatt tactgcaatt caggtcaatg aatctttgtt gagtacctgt aggtacaagg       300
     ctccatgtta agtgctggaa actcttataa ggactccgtc agcctaaact ctcacataac       360
     tttaatctga tgggaaagac aaggatataa agtttttttc agtgcaacat                  410
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