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EBI Dbfetch

ID   CL320165; SV 1; linear; genomic DNA; GSS; MAM; 708 BP.
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AC   CL320165;
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DT   20-AUG-2004 (Rel. 80, Created)
DT   16-MAY-2010 (Rel. 104, Last updated, Version 6)
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DE   CH242_2A3.f CHORI-242 Sus scrofa genomic clone CH242_2A3, genomic survey
DE   sequence.
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KW   GSS.
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OS   Sus scrofa (pig)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Suina; Suidae; Sus.
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RN   [1]
RP   1-708
RX   DOI; 10.1080/10495390701807634.
RX   PUBMED; 18228174.
RA   Rogatcheva M.B., Chen K., Larkin D.M., Meyers S.N., Marron B.M., He W.,
RA   Schook L.B., Beever J.E.;
RT   "Piggy-BACing the human genome I: constructing a porcine BAC physical map
RT   through comparative genomics";
RL   Anim. Biotechnol. 19(1):28-42(2008).
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DR   MD5; 1443fd376af6482c342c813f255bdfab.
DR   EuropePMC; PMC2323232; 17625002.
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CC   Contact: Lawrence B. Schook
CC   Department of Animal Sciences
CC   University of Illinois at Urbana Champaign
CC   1201 W. Gregory Dr., Urbana, IL 61801, USA
CC   Tel: 217 265 5326
CC   Fax: 217 244 5617
CC   Email: schook@uiuc.edu
CC   Clones are derived from the porcine BAC library CHORI-242
CC   (http://www.bacpac.chori.org/porcine242.htm). For BAC library
CC   availability, please contact Pieter de Jong (pdejong@chori.org).
CC   Clones may be purchased from BACPAC Resources
CC   (http://BACPACorders.chori.org). This work was undertaken as part
CC   of the International Swine Genome Sequencing Consortium by
CC   University of Illinois at Urbana Champaign, USA with funds provided
CC   by grant No. AG2002-34480-11828 from USDA-CSREES and
CC   AG2001-35205-09965 from USDA/NRI (Livestock Genome Sequencing
CC   Initiative)
CC   Plate: 2  row: A  column: 3
CC   Seq primer: T7
CC   Class: BAC ends.
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FH   Key             Location/Qualifiers
FH
FT   source          1..708
FT                   /organism="Sus scrofa"
FT                   /strain="breed: Durok (#2-14)"
FT                   /mol_type="genomic DNA"
FT                   /sex="female"
FT                   /clone_lib="CHORI-242"
FT                   /clone="CH242_2A3"
FT                   /cell_type="blood"
FT                   /note="Vector: pTARBAC1.3; Site_1: MboI; Site_2: MboI;
FT                   porcine female BAC library produced by Pieter de Jong"
FT                   /db_xref="taxon:9823"
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SQ   Sequence 708 BP; 246 A; 93 C; 112 G; 257 T; 0 other;
     gattctgcag gatgttgaga aaactaaagt ccttgcagat tcagtcatgg cacagccatt        60
     ttctatagga gcaaaatagc taccaaacag acattaagaa catggcatgc ccttatttaa       120
     ggcattaata tatcaataag catgttgaaa tggatcatca gtttttaaat tttcaaaact       180
     aatttttttt cagataagag tatagcagat caaacagttg tgaaaaaata ttttctacta       240
     ggtcaatgcc ttcactctta ttgagatatg taagattatt ttcttgcaat ccctaatttc       300
     tattcaaatg atataaaatg tgtatcttgc ttaagtggta cagattcctc ttaattttta       360
     tattcataat ttaacaatta tgattataac agtgaaattt tgtcctaata aaccatagtt       420
     cattgaaaaa ttttatatat aatgaatgta ttttatatat aaaattggtg aatgtgattt       480
     ctaaatatag ttttcatatt caatttgtca tataatccaa tgttggtcat gtttccttat       540
     tcatttaatt cttacataaa aattgctaaa tctgcaaact attgcatttg gagtggatag       600
     caatgagatc ctgctgtata gcacagggaa ctatatctag tcacttatga tggaacatga       660
     tagaggataa tgtgagaaag agaatgtata tatatgtgtg tgactggg                    708
//


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