Dbfetch
ID BC074766; SV 2; linear; mRNA; STD; HUM; 891 BP. XX AC BC074766; XX DT 08-JUL-2004 (Rel. 80, Created) DT 15-OCT-2008 (Rel. 97, Last updated, Version 5) XX DE Homo sapiens programmed cell death 1 ligand 2, mRNA (cDNA clone MGC:103803 DE IMAGE:30915184), complete cds. XX KW MGC. XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-891 RX DOI; 10.1073/pnas.242603899. RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-891 RG NIH MGC Project RA ; RT ; RL Submitted (25-JUN-2004) to the INSDC. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR MD5; f2398718438187c5fc229b86ede8530c. DR Ensembl-Gn; ENSG00000197646; homo_sapiens. DR Ensembl-Tr; ENST00000397747; homo_sapiens. XX CC On Aug 4, 2004 this sequence version replaced gi:49902039. CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Genome Sequence Centre, British Columbia Cancer CC Center CC cDNA Library Preparation: British Columbia Cancer Research Center CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Genome Sequence Centre, CC BC Cancer Agency, Vancouver, BC, Canada CC info@bcgsc.bc.ca CC Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson CC Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen CC Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel CC Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave CC Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth CC Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, CC Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR CC Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, CC Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRBU Plate: 1 Row: B Column: 5. CC Differences found between this sequence and the human reference CC genome (build 36) are described in misc_difference features below. XX FH Key Location/Qualifiers FH FT source 1..891 FT /organism="Homo sapiens" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NIH_MGC_272" FT /clone="MGC:103803 IMAGE:30915184" FT /tissue_type="Brain, PCR rescued clones" FT /note="Vector: pCR4 Topo TA with reversed insert" FT /db_xref="taxon:9606" FT gene 1..891 FT /gene="PDCD1LG2" FT /note="synonyms: PDL2, PDCD1L2, B7DC, PD-L2, Btdc, FT bA574F11.2, CD273" FT CDS 35..856 FT /codon_start=1 FT /gene="PDCD1LG2" FT /product="programmed cell death 1 ligand 2" FT /db_xref="GOA:Q9BQ51" FT /db_xref="H-InvDB:HIT000265273.12" FT /db_xref="HGNC:HGNC:18731" FT /db_xref="InterPro:IPR003599" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR013162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="UniProtKB/Swiss-Prot:Q9BQ51" FT /protein_id="AAH74766.1" FT /translation="MIFLLLMLSLELQLHQIAALFTVTVPKELYIIEHGSNVTLECNFD FT TGSHVNLGAITASLQKVENDTSPHRERATLLEEQLPLGKASFHIPQVQVRDEGQYQCII FT IYGVAWDYKYLTLKVKASYRKINTHILKVPETDEVELTCQATGYPLAEVSWPNVSVPAN FT TSHSRTPEGLYQVTSVLRLKPPPGRNFSCVFWNTHVRELTLASIDLQSQMEPRTHPTWL FT LHIFIPSCIIAFIFIATVIALRKQLCQKLYSSKDTTKRPVTTTKREVNSAI" FT misc_difference 720 FT /gene="PDCD1LG2" FT /note="'C' in cDNA is 'T' in the human genome; amino acid FT difference: 'S' in cDNA, 'F' in the human genome." FT misc_difference 862 FT /gene="PDCD1LG2" FT /note="'G' in cDNA is 'T' in the human genome." XX SQ Sequence 891 BP; 262 A; 237 C; 196 G; 196 T; 0 other; gagctgtggc aagtcctcat atcaaataca gaacatgatc ttcctcctgc taatgttgag 60 cctggaattg cagcttcacc agatagcagc tttattcaca gtgacagtcc ctaaggaact 120 gtacataata gagcatggca gcaatgtgac cctggaatgc aactttgaca ctggaagtca 180 tgtgaacctt ggagcaataa cagccagttt gcaaaaggtg gaaaatgata catccccaca 240 ccgtgaaaga gccactttgc tggaggagca gctgccccta gggaaggcct cgttccacat 300 acctcaagtc caagtgaggg acgaaggaca gtaccaatgc ataatcatct atggggtcgc 360 ctgggactac aagtacctga ctctgaaagt caaagcttcc tacaggaaaa taaacactca 420 catcctaaag gttccagaaa cagatgaggt agagctcacc tgccaggcta caggttatcc 480 tctggcagaa gtatcctggc caaacgtcag cgttcctgcc aacaccagcc actccaggac 540 ccctgaaggc ctctaccagg tcaccagtgt tctgcgccta aagccacccc ctggcagaaa 600 cttcagctgt gtgttctgga atactcacgt gagggaactt actttggcca gcattgacct 660 tcaaagtcag atggaaccca ggacccatcc aacttggctg cttcacattt tcatcccctc 720 ctgcatcatt gctttcattt tcatagccac agtgatagcc ctaagaaaac aactctgtca 780 aaagctgtat tcttcaaaag acacaacaaa aagacctgtc accacaacaa agagggaagt 840 gaacagtgct atctgaacct ggggtcttgg gagccagggt gacctgatat g 891 //