Dbfetch
ID BC066841; SV 1; linear; mRNA; STD; MUS; 3697 BP. XX AC BC066841; XX DT 04-MAR-2004 (Rel. 79, Created) DT 24-SEP-2008 (Rel. 97, Last updated, Version 8) XX DE Mus musculus CD274 antigen, mRNA (cDNA clone MGC:76638 IMAGE:30101931), DE complete cds. XX KW MGC. XX OS Mus musculus (house mouse) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; OC Murinae; Mus; Mus. XX RN [1] RP 1-3697 RX DOI; 10.1073/pnas.242603899. RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-3697 RG NIH MGC Project RA ; RT ; RL Submitted (01-MAR-2004) to the INSDC. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR MD5; 49c93ed7beebfb1c2606959b769199b0. DR Ensembl-Gn; ENSMUSG00000016496; mus_musculus. DR Ensembl-Gn; MGP_129S1SvImJ_G0025022; mus_musculus_129s1svimj. DR Ensembl-Gn; MGP_AJ_G0024999; mus_musculus_aj. DR Ensembl-Gn; MGP_AKRJ_G0024967; mus_musculus_akrj. DR Ensembl-Gn; MGP_BALBcJ_G0024998; mus_musculus_balbcj. DR Ensembl-Gn; MGP_C3HHeJ_G0024754; mus_musculus_c3hhej. DR Ensembl-Gn; MGP_C57BL6NJ_G0025439; mus_musculus_c57bl6nj. DR Ensembl-Gn; MGP_CASTEiJ_G0024224; mus_musculus_casteij. DR Ensembl-Gn; MGP_CBAJ_G0024732; mus_musculus_cbaj. DR Ensembl-Gn; MGP_DBA2J_G0024864; mus_musculus_dba2j. DR Ensembl-Gn; MGP_FVBNJ_G0024826; mus_musculus_fvbnj. DR Ensembl-Gn; MGP_LPJ_G0024949; mus_musculus_lpj. DR Ensembl-Gn; MGP_NODShiLtJ_G0024853; mus_musculus_nodshiltj. DR Ensembl-Gn; MGP_NZOHlLtJ_G0025494; mus_musculus_nzohlltj. DR Ensembl-Gn; MGP_PWKPhJ_G0023972; mus_musculus_pwkphj. DR Ensembl-Gn; MGP_WSBEiJ_G0024291; mus_musculus_wsbeij. DR Ensembl-Tr; ENSMUST00000016640; mus_musculus. DR Ensembl-Tr; MGP_129S1SvImJ_T0051475; mus_musculus_129s1svimj. DR Ensembl-Tr; MGP_AJ_T0051491; mus_musculus_aj. DR Ensembl-Tr; MGP_AKRJ_T0051438; mus_musculus_akrj. DR Ensembl-Tr; MGP_BALBcJ_T0051437; mus_musculus_balbcj. DR Ensembl-Tr; MGP_C3HHeJ_T0051163; mus_musculus_c3hhej. DR Ensembl-Tr; MGP_C57BL6NJ_T0051926; mus_musculus_c57bl6nj. DR Ensembl-Tr; MGP_CASTEiJ_T0051298; mus_musculus_casteij. DR Ensembl-Tr; MGP_CBAJ_T0051107; mus_musculus_cbaj. DR Ensembl-Tr; MGP_DBA2J_T0051211; mus_musculus_dba2j. DR Ensembl-Tr; MGP_FVBNJ_T0051170; mus_musculus_fvbnj. DR Ensembl-Tr; MGP_LPJ_T0051331; mus_musculus_lpj. DR Ensembl-Tr; MGP_NODShiLtJ_T0051162; mus_musculus_nodshiltj. DR Ensembl-Tr; MGP_NZOHlLtJ_T0052047; mus_musculus_nzohlltj. DR Ensembl-Tr; MGP_PWKPhJ_T0050905; mus_musculus_pwkphj. DR Ensembl-Tr; MGP_WSBEiJ_T0050456; mus_musculus_wsbeij. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Dr. Angelo L. Vescovi (Institute for Stem Cell CC Research, Italy) CC cDNA Library Preparation: Yulan Piao and Minoru Ko (National CC Institute on Aging, NIH: http://lgsun.grc.nia.nih.gov/cDNA/) CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 144 Row: g Column: 18 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 45433566. CC Differences found between this sequence and the mouse C57BL/6J CC genome (build 36) are described in misc_difference features below. XX FH Key Location/Qualifiers FH FT source 1..3697 FT /organism="Mus musculus" FT /lab_host="DH10B" FT /strain="CD1" FT /mol_type="mRNA" FT /clone_lib="NIA Mouse Neural Stem Cell (Differentiated) FT cDNA Library (Long)" FT /clone="MGC:76638 IMAGE:30101931" FT /tissue_type="Neural Stem Cell, (Differentiated), adult FT mouse" FT /note="Vector: pSPORT1" FT /db_xref="taxon:10090" FT gene 1..3697 FT /gene="Cd274" FT /note="synonyms: Pdcd1l1, B7-H1, PD-L1" FT CDS 67..939 FT /codon_start=1 FT /gene="Cd274" FT /product="CD274 antigen" FT /db_xref="GOA:Q9EP73" FT /db_xref="InterPro:IPR003599" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR013106" FT /db_xref="InterPro:IPR013162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="MGI:MGI:1926446" FT /db_xref="UniProtKB/Swiss-Prot:Q9EP73" FT /protein_id="AAH66841.1" FT /translation="MRIFAGIIFTACCHLLRAFTITAPKDLYVVEYGSNVTMECRFPVE FT RELDLLALVVYWEKEDEQVIQFVAGEEDLKPQHSNFRGRASLPKDQLLKGNAALQITDV FT KLQDAGVYCCIISYGGADYKRITLKVNAPYRKINQRISVDPATSEHELICQAEGYPEAE FT VIWTNSDHQPVSGKRSVTTSRTEGMLLNVTSSLRVNATANDVFYCTFWRSQPGQNHTAE FT LIIPELPATHPPQNRTHWVLLGSILLFLIVVSTVLLFLRKQVRMLDVEKCGVEDTSSKN FT RNDTQFEET" FT misc_difference 2609..2612 FT /gene="Cd274" FT /note="4 bases in cDNA are not found in the mouse genome." FT misc_difference 3627..3697 FT /gene="Cd274" FT /note="polyA tail: 71 bases do not align to the mouse FT genome." XX SQ Sequence 3697 BP; 1006 A; 855 C; 773 G; 1063 T; 0 other; gcctcatgcc aggctgcact tgcacgtcgc gggccagtct cctcgcctgc agatagttcc 60 caaaacatga ggatatttgc tggcattata ttcacagcct gctgtcactt gctacgggcg 120 tttactatca cggctccaaa ggacttgtac gtggtggagt atggcagcaa cgtcacgatg 180 gagtgcagat tccctgtaga acgggagctg gacctgcttg cgttagtggt gtactgggaa 240 aaggaagatg agcaagtgat tcagtttgtg gcaggagagg aggaccttaa gcctcagcac 300 agcaacttca gggggagagc ctcgctgcca aaggaccagc ttttgaaggg aaatgctgcc 360 cttcagatca cagacgtcaa gctgcaggac gcaggcgttt actgctgcat aatcagctac 420 ggtggtgcgg actacaagcg aatcacgctg aaagtcaatg ccccataccg caaaatcaac 480 cagagaattt ccgtggatcc agccacttct gagcatgaac taatatgtca ggccgagggt 540 tatccagaag ctgaggtaat ctggacaaac agtgaccacc aacccgtgag tgggaagaga 600 agtgtcacca cttcccggac agaggggatg cttctcaatg tgaccagcag tctgagggtc 660 aacgccacag cgaatgatgt tttctactgt acgttttgga gatcacagcc agggcaaaac 720 cacacagcgg agctgatcat cccagaactg cctgcaacac atcctccaca gaacaggact 780 cactgggtgc ttctgggatc catcctgttg ttcctcattg tagtgtccac ggtcctcctc 840 ttcttgagaa aacaagtgag aatgctagat gtggagaaat gtggcgttga agatacaagc 900 tcaaaaaacc gaaatgatac acaattcgag gagacgtaag cagtgttgaa ccctctgatc 960 gtcgattggc agcttgtggt ctgtgaaaga aagggcccat gggacatgag tccaaagact 1020 caagatggaa cctgagggag agaaccaaga aagtgttggg agaggagcct ggaacaacgg 1080 acattttttc cagggagaca ctgctaagca agttgcccat cagtcgtctt gggaaatgga 1140 ttgagggttc ctggcttagc agctggtcct tgcacagtga ccttttcctc tgctcagtgc 1200 cgggatgaga gatggagtca tgagtgttga agaataagtg ccttctattt attttgagtc 1260 tgtgtgttct cactttgggc atgtaattat gactggtgaa ttctgacgac atgatagatc 1320 ttaagatgta gtcaccaaac tcaactgctg cttagcatcc tccgtaacta ctgatacaag 1380 cagggaacac agaggtcacc tgcttggttt gacaggctct tgctgtctga ctcaaataat 1440 ctttattttt cagtcctcaa ggctcttcga tagcagttgt tctgtatcag ccttataggt 1500 gtcaggtata gcactcaaca tctcatctca ttacaatagc aaccctcatc accatagcaa 1560 cagctaacct ctgttatcct cacttcatag ccaggaagct gagcgactaa gtcacttgcc 1620 cacagagtat cagctctcag atttctgttc ttcagccact gtcctttcag gatagaattt 1680 gtcgttaaga aattaattta aaaactgatt attgagtagc attgtatatc aatcacaaca 1740 tgccttgtgc actgtgctgg cctctgagca taaagatgta cgccggagta ccggtcggac 1800 atgtttatgt gtgttaaata ctcagagaaa tgttcattaa caaggagctt gcattttaga 1860 gacactggaa agtaactcca gttcattgtc tagcattaca tttacctcat ttgctatcct 1920 tgccatacag tctcttgttc tccatgaagt gtcatgaatc ttgttgaata gttcttttat 1980 tttttaaatg tttctattta aatgatattg acatctgagg cgatagctca gttggtaaaa 2040 ccctttcctc acaagtgtga aaccctgagt cttatcccta gaacccacat aaaaaacagt 2100 tgcgtatgtt tgtgcatgct tttgatccca gcactaggga ggcagaggca ggcagatcct 2160 gagctctcat tgaccaccca gcctagccta catggttagc tccaggccta caggagctgg 2220 cagagcctga aaaacgatgc ctagacacac acacacacac acacacacac acacacacac 2280 acacacacca tgtactcata gacctaagtg caccctccta cacatgcaca cacatacaat 2340 tcaaacacaa atcaacaggg aattgtctca gaatggtccc caagacaaag aagaagaaaa 2400 acaccaaacc agctctattc cctcagccta tcctctctac tccttcctag aagcaactac 2460 tattgttttt gtatataaat ttacccaacg acagttaata tgtagaatat atattaaagt 2520 gtctgtcaat atatattatc tctttctttc tttcttcctt tctttctttc tttctttctt 2580 tctttctttc tttctttctt tctttctttc ttccttcctt ccttccttcc ttccttcctt 2640 ccttcctttc tttctttctt tctttttttc tgtctatctg tacctaaatg gttgctcact 2700 atgcattttc tgtgctcttc gcccttttta tttaatgtat ggatatttat gctgcttcca 2760 gaatggatct aaagctcttt gtttctaggt tttctccccc atccttctag gcatctctca 2820 cactgtctag gccagacacc atgtctgctg cctgaatctg tagacaccat ttataaagca 2880 cgtactcacc gagtttgtat ttggcttgtt ctgtgtctga ttaaagggag accatgagtc 2940 cccagggtac actgagttac cccagtacca agggggagcc ttgtttgtgt ctccatggca 3000 gaagcaggcc tggagccatt ttggtttctt ccttgacttc tctcaaacac agacgcctca 3060 cttgctcatt acaggttctc ctttgggaat gtcagcattg ctccttgact gctggctgcc 3120 ctggaaggag cccattagct ctgtgtgagc ccttgacagc tactgcctct ccttaccaca 3180 ggggcctcta agatactgtt acctagaggt cttgaggatc tgtgttctct ggggggagga 3240 aaggaggagg aacccagaac tttcttacag ttttccttgt tctgtcacat gtcaagactg 3300 aaggaacagg ctgggctacg tagtgagatc ctgtctcaaa ggaaagacga gcatagccga 3360 acccccggtg gaaccccctc tgttacctgt tcacacaagc ttattgatga gtctcatgtt 3420 aatgtcttgt ttgtatgaag tttaagaaaa tatcgggttg ggcaacacat tctatttatt 3480 cattttattt gaaatcttaa tgccatctca tggtgttgga ttggtgtggc actttattct 3540 tttgtgttgt gtataaccat aaattttatt ttgcatcaga ttgtcaatgt attgcattaa 3600 tttaataaat atttttattt attaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 3660 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa 3697 //