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EBI Dbfetch

ID   AY656679; SV 1; linear; mRNA; STD; HUM; 777 BP.
XX
AC   AY656679;
XX
DT   01-JAN-2005 (Rel. 82, Created)
DT   15-OCT-2008 (Rel. 97, Last updated, Version 4)
XX
DE   Homo sapiens MHC class II antigen (HLA-DPB1) mRNA, HLA-DPB1*0501 allele,
DE   complete cds.
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-777
RA   Lee E., Kim E., Kwack K.;
RT   ;
RL   Submitted (17-JUN-2004) to the INSDC.
RL   National Genome Research Institute, National Institute of Health, 5
RL   Nokbun-dong, Eunpyung-gu, Seoul 122-701, Republic of Korea
XX
DR   MD5; fc98bb4ba931c42a4637fe4770d9e893.
DR   Ensembl-Gn; ENSG00000215048; homo_sapiens.
DR   Ensembl-Gn; ENSG00000223865; homo_sapiens.
DR   Ensembl-Gn; ENSG00000226826; homo_sapiens.
DR   Ensembl-Gn; ENSG00000230763; homo_sapiens.
DR   Ensembl-Gn; ENSG00000236693; homo_sapiens.
DR   Ensembl-Gn; ENSG00000237710; homo_sapiens.
DR   Ensembl-Tr; ENST00000399500; homo_sapiens.
DR   Ensembl-Tr; ENST00000411749; homo_sapiens.
DR   Ensembl-Tr; ENST00000418931; homo_sapiens.
DR   Ensembl-Tr; ENST00000425130; homo_sapiens.
DR   Ensembl-Tr; ENST00000433800; homo_sapiens.
DR   Ensembl-Tr; ENST00000454006; homo_sapiens.
DR   H-InvDB; HIT000332068_04.4.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..777
FT                   /organism="Homo sapiens"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:9606"
FT   gene            1..777
FT                   /gene="HLA-DPB1"
FT                   /allele="HLA-DPB1*0501"
FT   CDS             1..777
FT                   /codon_start=1
FT                   /gene="HLA-DPB1"
FT                   /allele="HLA-DPB1*0501"
FT                   /product="MHC class II antigen"
FT                   /db_xref="GOA:P04440"
FT                   /db_xref="H-InvDB:HIT000332068_03.4"
FT                   /db_xref="HGNC:HGNC:4940"
FT                   /db_xref="IMGT/HLA:DPB1*05:01:01"
FT                   /db_xref="InterPro:IPR000353"
FT                   /db_xref="InterPro:IPR003006"
FT                   /db_xref="InterPro:IPR003597"
FT                   /db_xref="InterPro:IPR007110"
FT                   /db_xref="InterPro:IPR011162"
FT                   /db_xref="InterPro:IPR013783"
FT                   /db_xref="InterPro:IPR014745"
FT                   /db_xref="PDB:3LQZ"
FT                   /db_xref="PDB:4P4K"
FT                   /db_xref="PDB:4P4R"
FT                   /db_xref="PDB:4P57"
FT                   /db_xref="UniProtKB/Swiss-Prot:P04440"
FT                   /protein_id="AAV71026.1"
FT                   /translation="MMVLQVSAAPRTVALTALLMVLLTSVVQGRATPENYLFQGRQECY
FT                   AFNGTQRFLERYIYNREELVRFDSDVGEFRAVTELGRPEAEYWNSQKDILEEKRAVPDR
FT                   MCRHNYELDEAVTLQRRVQPKVNVSPSKKGPLQHHNLLVCHVTDFYPGSIQVRWFLNGQ
FT                   EETAGVVSTNLIRNGDWTFQILVMLEMTPQQGDVYICQVEHTSLDSPVTVEWKAQSDSA
FT                   RSKTLTGAGGFMLGLIICGVGIFMHRRSKKVQRGSA"
XX
SQ   Sequence 777 BP; 176 A; 206 C; 250 G; 145 T; 0 other;
     atgatggttc tgcaggtttc tgcggccccc cggacagtgg ctctgacggc gttactgatg        60
     gtgctgctca catctgtggt ccagggcagg gccactccag agaattacct tttccaggga       120
     cggcaggaat gctacgcgtt taatgggaca cagcgcttcc tggagagata catctacaac       180
     cgggaggagc tcgtgcgctt cgacagcgac gtgggggagt tccgggcggt gacggagctg       240
     gggcggcctg aggcggagta ctggaacagc cagaaggaca tcctggagga gaagcgggca       300
     gtgccggaca ggatgtgcag acacaactac gagctggacg aggccgtgac cctgcagcgc       360
     cgagtccagc ctaaggtgaa cgtttccccc tccaagaagg ggcccctgca gcaccacaac       420
     ctgcttgtct gccacgtgac agatttctac ccaggcagca ttcaagtccg atggttcctg       480
     aatggacagg aggaaacagc tggggtcgtg tccaccaacc tgatccgtaa tggagactgg       540
     accttccaga tcctggtgat gctggaaatg accccccagc agggagacgt ctacatctgc       600
     caagtggagc acaccagcct ggacagtcct gtcaccgtgg agtggaaggc acagtctgat       660
     tctgcccgga gtaagacatt gacgggagct gggggcttca tgctggggct catcatctgt       720
     ggagtgggca tcttcatgca caggaggagc aagaaagttc aacgaggatc tgcataa          777
//


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