Dbfetch
ID AY645766; SV 1; linear; genomic DNA; STD; HUM; 5590 BP. XX AC AY645766; XX DT 19-JUL-2004 (Rel. 80, Created) DT 17-JUN-2008 (Rel. 96, Last updated, Version 3) XX DE Homo sapiens isolate Afr-Am024 MHC class Ib antigen (HLA-G) gene, DE HLA-G*010102 allele, complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-5590 RX DOI; 10.1007/s00251-005-0076-z. RX PUBMED; 16570139. RA Pyo C.W., Williams L.M., Moore Y., Hyodo H., Li S.S., Zhao L.P., RA Sageshima N., Ishitani A., Geraghty D.E.; RT "HLA-E, HLA-F, and HLA-G polymorphism: genomic sequence defines haplotype RT structure and variation spanning the nonclassical class I genes"; RL Immunogenetics 58(4):241-251(2006). XX RN [2] RP 1-5590 RA Pyo C.-W., Ishitani A., Moore Y.F., Geraghty D.E.; RT ; RL Submitted (04-JUN-2004) to the INSDC. RL Clinical Division, Fred Hutchinson Cancer Research Center, 1100 Fairview RL Ave. N., D4-100, Seattle, WA 98109-1024, USA XX DR MD5; f72019465fb8b8e806e836f8ff96ab67. DR Ensembl-Gn; ENSG00000204632; homo_sapiens. DR Ensembl-Gn; ENSG00000206506; homo_sapiens. DR Ensembl-Gn; ENSG00000230413; homo_sapiens. DR Ensembl-Gn; ENSG00000233095; homo_sapiens. DR Ensembl-Gn; ENSG00000235346; homo_sapiens. DR Ensembl-Gn; ENSG00000235680; homo_sapiens. DR Ensembl-Gn; ENSG00000237216; homo_sapiens. DR Ensembl-Tr; ENST00000360323; homo_sapiens. DR Ensembl-Tr; ENST00000383621; homo_sapiens. DR Ensembl-Tr; ENST00000423011; homo_sapiens. DR Ensembl-Tr; ENST00000423373; homo_sapiens. DR Ensembl-Tr; ENST00000428701; homo_sapiens. DR Ensembl-Tr; ENST00000428952; homo_sapiens. DR Ensembl-Tr; ENST00000444098; homo_sapiens. DR Ensembl-Tr; ENST00000449127; homo_sapiens. DR Ensembl-Tr; ENST00000546545; homo_sapiens. DR Ensembl-Tr; ENST00000546634; homo_sapiens. DR Ensembl-Tr; ENST00000547241; homo_sapiens. DR Ensembl-Tr; ENST00000547931; homo_sapiens. DR Ensembl-Tr; ENST00000550897; homo_sapiens. DR Ensembl-Tr; ENST00000553052; homo_sapiens. DR IMGT/HLA; HLA-G*01:01:02:02; HLA02285. XX FH Key Location/Qualifiers FH FT source 1..5590 FT /organism="Homo sapiens" FT /chromosome="6" FT /map="6p21.3" FT /isolate="Afr-Am024" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <1202..>3739 FT /gene="HLA-G" FT /allele="HLA-G*010102" FT mRNA join(<1202..1274,1404..1673,1900..2175,2775..3050, FT 3173..3289,3735..>3739) FT /gene="HLA-G" FT /allele="HLA-G*010102" FT /product="MHC class Ib antigen" FT CDS join(1202..1274,1404..1673,1900..2175,2775..3050, FT 3173..3289,3735..3739) FT /codon_start=1 FT /gene="HLA-G" FT /allele="HLA-G*010102" FT /product="MHC class Ib antigen" FT /db_xref="GOA:Q6DU14" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:Q6DU14" FT /protein_id="AAT73249.1" FT /translation="MVVMAPRTLFLLLSGALTLTETWAGSHSMRYFSAAVSRPGRGEPR FT FIAMGYVDDTQFVRFDSDSACPRMEPRAPWVEQEGPEYWEEETRNTKAHAQTDRMNLQT FT LRGYYNQSEASSHTLQWMIGCDLGSDGRLLRGYEQYAYDGKDYLALNEDLRSWTAADTA FT AQISKRKCEAANVAEQRRAYLEGTCVEWLHRYLENGKEMLQRADPPKTHVTHHPVFDYE FT ATLRCWALGFYPAEIILTWQRDGEDQTQDVELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPEPLMLRWKQSSLPTIPIMGIVAGLVVLAAVVTGAAVAAVLWRKKSSD" XX SQ Sequence 5590 BP; 1237 A; 1442 C; 1532 G; 1379 T; 0 other; gaggaaagaa ttccaaagca gcggaactct taggtttaaa cacattgttt tatagatttt 60 attacatcca tctacagagc ctcgctgggt gttctttgca gttggccttt aatatcttat 120 gtgggtctgc ctagaaacta attgtttttt atgttaatca ggtttaaaaa atactaagta 180 ttcctaaaaa atatacactc cactcacatg tggatacttc ctaaaaacag gcagtgcatg 240 agcactagtg aggggcattg tgactgcact gaacacttac aactgtgagg tgaataaagt 300 ttgtgctggc tcctggttgc aacatatagt aacatagtgt ggtactttgt cttgaggaga 360 tgtcctggac tcacacggaa acttagggct acggaatgaa ggtaaattta aaataaaaca 420 agcgggagtc acagatacat tgtctgggaa agtgaaactt aagagctttg tgagtcctgt 480 tgtaaggctt ttagatgcat ttatatacca acgggccaaa gtcacatttt ttacctatta 540 gattcctgat cattcagggg ttaccaagat tatgctaccc actatagtta ataaacaaaa 600 agcaaactgg tctctattct atctcatgca ctcaggcaca acttttccag atttaagggg 660 gaaaaaaaac cctgtcttta cacctacaat cccagggcga gctcactctc tggcaccaag 720 ctccgtgggg tgatttttct tctagaagag tacaggagga caggcaagga gtgggaggca 780 gggagtccag ttcagggaca gggattccgg gatgaaaagt gaagggagag ggacagggac 840 cttgccgagg gtttctccct ggtttctcag acagctcctg ggccaagact cagggagaca 900 ctgagacaga acgcttggca caagagtagc ggggtcaggg cgaagtccca gggcctcaag 960 cgtggctctc agggtctcag gccccacagg cggtgtatgg attggggagg ccccgcgttg 1020 gggattctct cctccttctc ctaacctgtg tcgggtcctt cttcctggat actcaccggg 1080 cggccccagt tctcactccc attaggtgac aggtttttag agaagccaat cagcgtcgcc 1140 gcggtcctgg ttctaaagtc ctcgctcacc cacccggact cattctcccc agacgccaag 1200 gatggtggtc atggcacccc gaaccctctt cctgctactc tcgggggccc tgaccctgac 1260 cgagacctgg gcgggtgagt gcggggtcag gagggaaacg gcccctgcgc ggaggaggga 1320 ggggccggcc cggcgggggc gcaggacccg gcagccgcgc cgggaggagg gtcgggcggg 1380 tctcaacctc tcctcgcccc caggctccca ctccatgagg tatttcagcg ccgccgtgtc 1440 ccggcccggc cgcggggagc cccgcttcat cgccatgggc tacgtggacg acacgcagtt 1500 cgtgcggttc gacagcgact cggcgtgtcc gaggatggag ccgcgggcgc cgtgggtgga 1560 gcaggagggg ccagagtatt gggaagagga gacacggaac accaaggccc acgcacagac 1620 tgacagaatg aacctgcaga ccctgcgcgg ctactacaac cagagcgagg ccagtgagta 1680 accccggccc agggcgcaga tcacgacccc ccacctccat gccccacgga cgccccgggt 1740 actcccgagt ctccgggtct gggatccacc ccgaggccgc gggacccgcc cagaccctct 1800 acctgggaga accccaggcg cctttaccaa aatccctgcg ggtgggtccg ggcgagggcg 1860 aggctcggtg ggcggggctg accgaagggg tggggccagg ttctcatacc ctccagtgga 1920 tgattggctg cgacctgggg tccgacggac gcctcctccg cgggtatgaa cagtatgcct 1980 acgatggcaa ggattacctc gccctgaacg aggacctgcg ctcctggacc gcagcggaca 2040 ctgcggctca gatctccaag cgcaagtgtg aggcggccaa tgtggctgaa caaaggagag 2100 cctacctgga gggcacgtgc gtggagtggc tccacagata cctggagaac gggaaggaga 2160 tgctgcagcg cgcgggtacc aggggcagtg gggcgcctcc ctgatctcct gtagacttcc 2220 cagcctggcc tagcacaagg agaggaggaa aatgggacca acaccagaat atcgccctcc 2280 ctctggtcct gagggagagg aatcctcctg ggtttccaga tcctgtacca gagagtgatt 2340 ctgagggccc gtcctgctct ctgggacaat taagggatga agtctctgag ggagtggagg 2400 ggaagacaat ccctggagga ctgatcaggg gttccctttg accccacagc agccttggca 2460 ccaggacttt tcccctcagg ccttgttctc tgcctcacac tcaatgtgtg tgggagtctg 2520 actccagctc ctctgagtcc cttggcctcc actcaggtca gaaccagagg tccctgctcc 2580 cccgctcaga gactagaact ttccaaggaa taggagatta tcccaggtgc ccgtgtccag 2640 gctggtgtct gggttctgtg ctcccttccc caccccaggt atctggttca ttcttaggat 2700 ggtcacatcc aggtgctgct ggagtgtccc atgagagatg caaagtgctt gagttttctg 2760 actcttcctt tcagaccccc ccaagacaca cgtgacccac caccctgtct ttgactatga 2820 ggccaccctg aggtgctggg ccctgggctt ctaccctgcg gagatcatac tgacctggca 2880 gcgggatggg gaggaccaga cccaggacgt ggagctcgtg gagaccaggc ctgcagggga 2940 tggaaccttc cagaagtggg cagctgtggt ggtgccttct ggagaggagc agagatacac 3000 gtgccatgtg cagcatgagg ggctgccgga gcccctcatg ctgagatgga gtaaggaggg 3060 agatggaggc atcatgtctg ttagggaaag caggagcctc tctgaagacc tttaacaggg 3120 tcggtggtga ggcctggggg tcagagaccc tcaccttcac ctcctttccc agagcagtct 3180 tccctgccca ccatccccat catgggtatc gttgctggtc tggttgtcct tgcagctgta 3240 gtcactggag ctgcggtcgc tgctgtgctg tggaggaaga agagctcagg taaggaaggg 3300 gtgacaagtg gggtctgagt tttcttgtcc cactgggggt ttcaagcccc aggtagaagt 3360 gcgccctgcc tggttactgg gaagcaccat ccacactcat gggcctaccc agcctgggcc 3420 ctgtgtgcca gcaccttctc ttttgtaaag cacctgtgac aatgaaggac agatttatca 3480 ccttgatgat tgtagtgatg gggacctgat cctagtaatc acaggtcagg ggaaggtccc 3540 tggctaagga cagaccttag gagggcagtt ggtcgaggac ccacatctgc tttccttgtt 3600 tttcctgatc ccgccctgag tctgcagtca cacatttctg gaaacttctc gagggtccaa 3660 gactaggagg ttcctctagg acctcatggc cctgccacct ttctggcctc tcacaggacg 3720 ttttcttccc acagattgaa aaggagggag ctactctcag gctgcaagta agtatgaagg 3780 aggctgatcc ctgagatcct tgggatcttg tgtttgggag cccatggggg agctcaccca 3840 ccccacaatt cctcctctgg ccacatctcc tgtggtctct gaccaggtgc tgtttttgtt 3900 ctactctagg cagtgacagt gcccagggct ctaatgtgtc tctcacggct tgtaaatgtg 3960 acaccccggg gggcctgatg tgtgtgggtt gttgagggaa acagtggaca tagctgtgct 4020 atgaggtttc tttgacttga atgtattgag catgtgatgg gctgtttaaa gtgtcacccc 4080 tcactgtgac tgatatgaat ttgttcatga atatttttct gtagtgtgaa acagctgccc 4140 tgtgtgggac tgagtggcaa gatttgttca tgcctccctt tgtgacttca agaaccctga 4200 cttctctttc tgcagagacc agcccacccc tgtgcccacc atgaccctct tcctcatgct 4260 gaactgcatt ccttccccaa tcacctttcc tgttccagaa aaggggctgg gatgtctccg 4320 tctctgtctc aaatttgtgg tgcactgagc tataacttac ttctgtatta aaattagaat 4380 ctgagtataa atttagtttt tcaaattatt tccaagagag attgatgggt taattaaagg 4440 agaagattcc tgaaatttga gagacaaaat aaatggaaga catgagaact ttccacagta 4500 cacgtgtttc ttgtgctgat ttgttgcagg agaggagagt agatggggct gcgcccagtg 4560 ggtgctcagg ccaccatgaa ctttatgtgg tcactgctca gctgggtcat ctttgctgct 4620 ccattgtcct tggcccttca gtagaacctt gtcccaccag gacctgtgat cacatagact 4680 tggatatcac ctagggtggt ccctacactt agaagttcct gtgttatcag aagaaaaatt 4740 ttcagacccc tacacctctt cccctccttc caggtctctt tcaattgtat tttccatctt 4800 tttttttttt tttttttttt tttttttttt ttttttgaga tggagtctca ctcaggctgg 4860 agtgcagtgg tgcaatctcg actcattgca acctccacct cccgggttca agcaatcctc 4920 ctgtcttagc ctccctagta actgggagta caggcacatg ccacgatacc cagctaattt 4980 tttgtatttt tagtaaagac gggatttcac catgttagcc aggatggtct tgatctcctg 5040 accttgtgat ctgcccgcct ctgcctccca aagtgctggg attacaggtg taagccacca 5100 tgcctggctt ccccaacctt cttaaaggaa gcagattctg aaacttcccg agaggagagg 5160 tcccagagtt tttcattgta gtttactttc tgttggaact cctcttctgc tctctctcct 5220 actcttcttc ctgccctgag ttgtagtaat cctattgctg gctccaaacc aaactcatgg 5280 atttgtaaag cagagtctaa tttagattca tatgtggttg gataattgga gccataagcc 5340 ttgggttatc tttcctcaag agacaaatat ggttgtgtgc tgcagtgtgc aggaggattg 5400 gtgtgggagg aggagggagg gagggaggac acaaaagcag ccctggtgag aaaagcactg 5460 gtgcatttat atccacatga gataatattg ttccacagcg gctacaaaat gacatttggc 5520 ctgagtctac attaataaag atattgcctt tagaataggg gggcgcacta cagtaatcat 5580 ccattcaagt 5590 //