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EBI Dbfetch

ID   AY534171; SV 1; linear; genomic DNA; STD; ENV; 547 BP.
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AC   AY534171;
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DT   28-MAR-2004 (Rel. 79, Created)
DT   05-FEB-2005 (Rel. 82, Last updated, Version 2)
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DE   Uncultured stramenopile clone U59 18S ribosomal RNA gene, partial sequence.
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KW   .
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OS   uncultured stramenopile
OC   Eukaryota; Stramenopiles; environmental samples.
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RN   [1]
RP   1-547
RX   DOI; 10.1128/AEM.71.2.804-810.2005.
RX   PUBMED; 15691934.
RA   Paez-Rubio T., Viau E., Romero-Hernandez S., Peccia J.;
RT   "Source bioaerosol concentration and rRNA gene-based identification of
RT   microorganisms aerosolized at a flood irrigation wastewater reuse site";
RL   Appl. Environ. Microbiol. 71(2):804-810(2005).
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RN   [2]
RP   1-547
RA   Paez-Rubio T., Viau E.J., Peccia J.;
RT   ;
RL   Submitted (26-JAN-2004) to the INSDC.
RL   Civil and Environmental Engineering, Arizona State University, Engineering
RL   Center G-Wing, Room 252, Tempe, AZ 85287-5306, USA
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DR   MD5; a4cf15a52f2998c441832f4a20a804b9.
DR   SILVA-SSU; AY534171.
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FH   Key             Location/Qualifiers
FH
FT   source          1..547
FT                   /organism="uncultured stramenopile"
FT                   /environmental_sample
FT                   /mol_type="genomic DNA"
FT                   /isolation_source="agricultural wastewater"
FT                   /clone="U59"
FT                   /note="amplified using universal primers 515F and 1392R"
FT                   /db_xref="taxon:152704"
FT   rRNA            <1..>547
FT                   /product="18S ribosomal RNA"
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SQ   Sequence 547 BP; 153 A; 97 C; 136 G; 161 T; 0 other;
     gtgccagcgc cgcggtaatt ccagctccaa tagcgtatac taaagttgtt gcagttaaaa        60
     agctcgtagt tgaatttctg gtctcggaca tcggtctgcc tcgaacgagg tacgtaccag       120
     ttgtctgaat ccatcctcgg ggaaaacatg tctggcattc agttgttggg catgggatcc       180
     tcgtcattta ctgtgagcaa aatagagtgt tcaaagcagg cttatgccgt tgaatacatt       240
     agcatggaat aataagatag gaccttggtc tattttgttg gtttgtactc caaggtaatg       300
     attaataggg atagttgggg gtattcgtat tcaattgtca gaggtgaaat tcttggattt       360
     atggaagacg aactactgcg aaagcattta ccaagggatg ttttcattaa tcaagaacga       420
     aagttagggg atcgaagatg attagatacc atcgtagtct taaccataaa ctatgccgac       480
     tagggattgg tggacgtttg taacgactcc atcagcacct tatgagaaat caaagtcttt       540
     gggttcc                                                                 547
//


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