ID AY457037; SV 2; linear; genomic DNA; STD; HUM; 270 BP.
XX
AC AY457037;
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DT 24-NOV-2003 (Rel. 77, Created)
DT 21-JUL-2010 (Rel. 105, Last updated, Version 7)
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DE Homo sapiens MHC class II antigen (HLA-DRB5) gene, HLA-DRB5*010101 variant
DE allele, exon 2 and partial cds.
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KW .
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OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
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RN [1]
RP 1-270
RX DOI; 10.1111/j.1399-0039.2006.00588.x.
RX PUBMED; 16671952.
RA Garino E., Berrino M., Bertinetto F., Caropreso P., Chidichimo R.,
RA Dametto E., Fasano M.E., Frisaldi E., Mazzola G., Tondat F., Boccadoro M.,
RA Bruno B., Amoroso A.;
RT "Identification of a new allele, HLA-DRB5*0113, through three different
RT molecular biology techniques";
RL Tissue Antigens 67(5):427-429(2006).
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RN [2]
RP 1-270
RA Garino E., Berrino M., Bertola L., Caropreso P., Chidichimo R.,
RA Dall'Omo A.M., Dametto E., Fasano M.E., Frisaldi E., Mazzola G., Tondat F.,
RA Boccadoro M., Bruno B., Curtoni E.S.;
RT ;
RL Submitted (04-NOV-2003) to the INSDC.
RL Dept. of Genetic, Biology and Biochemistry, University of Turin, Via
RL Santena, 19, Turin 10126, Italy
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RN [3]
RC Sequence update by submitter
RP 1-270
RA Garino E., Berrino M., Bertola L., Caropreso P., Chidichimo R.,
RA Dall'Omo A.M., Dametto E., Fasano M.E., Frisaldi E., Mazzola G., Tondat F.,
RA Boccadoro M., Bruno B., Curtoni E.S.;
RT ;
RL Submitted (21-JAN-2004) to the INSDC.
RL Dept. of Genetic, Biology and Biochemistry, University of Turin, Via
RL Santena, 19, Turin 10126, Italy
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DR MD5; 648ce9cb06ecac79729701e17b253d99.
DR Ensembl-Gn; ENSG00000198502; homo_sapiens.
DR Ensembl-Tr; ENST00000374975; homo_sapiens.
DR IMGT/HLA; HLA-DRB5*01:13; HLA01871.
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CC On Jan 21, 2004 this sequence version replaced gi:38426807.
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FH Key Location/Qualifiers
FH
FT source 1..270
FT /organism="Homo sapiens"
FT /chromosome="6"
FT /map="6p21.3-p21.1"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene <1..>270
FT /gene="HLA-DRB5"
FT /allele="HLA-DRB5*010101 variant"
FT mRNA <1..>270
FT /gene="HLA-DRB5"
FT /allele="HLA-DRB5*010101 variant"
FT /product="MHC class II antigen"
FT CDS <1..>270
FT /codon_start=3
FT /gene="HLA-DRB5"
FT /allele="HLA-DRB5*010101 variant"
FT /product="MHC class II antigen"
FT /db_xref="GOA:Q30154"
FT /db_xref="HGNC:HGNC:4953"
FT /db_xref="InterPro:IPR000353"
FT /db_xref="InterPro:IPR003006"
FT /db_xref="InterPro:IPR003597"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR014745"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="PDB:1FV1"
FT /db_xref="PDB:1H15"
FT /db_xref="PDB:1HQR"
FT /db_xref="PDB:1ZGL"
FT /db_xref="UniProtKB/Swiss-Prot:Q30154"
FT /protein_id="AAR20446.2"
FT /translation="RFLQQDKYECHFFNGTERVRFLHRDIYNQEEDLRFDSDVGEYRAV
FT TELGRPDEEYWNSQKDFLEDRRAAVDTYCRHNYGVGESFTVQRR"
FT exon <1..>270
FT /gene="HLA-DRB5"
FT /allele="HLA-DRB5*010101 variant"
FT /number=2
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SQ Sequence 270 BP; 63 A; 63 C; 97 G; 47 T; 0 other;
cacgtttctt gcagcaggat aagtatgagt gtcatttctt caacgggacg gagcgggtgc 60
ggttcctgca cagagacatc tataaccaag aggaggactt gcgcttcgac agcgacgtgg 120
gggagtaccg ggcggtgacg gagctggggc ggcctgatga ggagtactgg aacagccaga 180
aggacttcct ggaagacagg cgcgccgcgg tggacaccta ctgcagacac aactacgggg 240
ttggtgagag cttcacagtg cagcggcgag 270
//